Xiphias gladius (swordfish): 120805090
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Entry
120805090 CDS
T07311
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
xgl
Xiphias gladius (swordfish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_9
FERM_f0
SH3_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120805090
NCBI-ProteinID:
XP_040010894
LinkDB
All DBs
Position
LG3:21871636..21926189
Genome browser
AA seq
2466 aa
AA seq
DB search
MTMPFSPLSSDEEQQRMLGNNRHLYPGAEDEEEEEEEEEEEMEEDERDEDGEEEENGELE
GEEEDDEEEMVEEVRRGGLLRGGRGEGHRQSGKLAARPSGDRQIRPGNPGHAANPYSSNP
GPTHQQPANQIQQQQQRRLKERSASSVPSEDAHIAMMVFRIGIPDIKQTKCLRFNPDATV
WKAKQQVLCSLTESLRDVLNYGLFQPATDGHDAKFLEEERLLREYPQSFEKGVPYLEFRY
KTRVYKQTNLDEKQLAKLHTKASLKKFMDYIQTSAVDKMAKFLDKGLDPNYQDADTGETP
LSLAVQCEPGGGEAIRVLVEGGAHIDFRAKDGLTPLHKAVRGHRHTALLVLLSLGASPDY
KDRRGLTPLYHTVLTGGDTSCCETLLYHHAKLGIRDENGWDETHQACQNGNSQHLEHLLF
YGADSSSQNASGNTALHICALYNKESCARILLYRGANKDTKNNSGQTPFQVAVMSGHFEL
GEIIKNHRDTDVVPFVESPKYAPQRRESGRTLTIPHPHPFLRANSDSSMNLPDWMAVPNA
PGTNIVSVQGYKHTGTLRSSSSPRGARTRSPSRGRIGDKEDRSRQSRRQGPAPINTTTQT
AGQRRRLYSAVPGRVFVATRAHSAQGEREISFNKGDRVKVLSVGEGGYWEGTVRGRTGWF
PSDCVEEVMLRSQDNRSESRGERAKRLFRHYTVGSYDSFDAPSDYIIKEKTVLLQKKDSE
GFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVK
VGHRQVVNMIRQGGNSLMVKVVMVTRNPDMDDGSRKKIPQQSKRLSTPAIALRSKSMTSE
LEEMVERAATPWKKKSEFESSQVTEKKRTVYQMALNKLDEILAAAQQTISTNDAPGTRGQ
GPKRERGRSFYGNEPNYGDQSGMGMMSSGLSLGYDRGQHTSGHAPQHGMLRQKSIGVPEE
EKQFLHPPTMKFARSLSVPGPDDIPPPPTTAPPDPPFSSAPPLGWRAKSSQQPSVSVSQS
TSTSAHYQPYSQSVHFTHGGRERAGGPTTGPSGGAADHTTSYAHAAAHTAQSRTASRKVA
YTGEPVGAGIGAGGGAKAAGLRRGYSTAVPPSSIATVMPQQQQTTQSQPQRVDRSAAGAG
AGGPKGGARRGKGPLVKQSKVEDLRMGQGTLGGKGSVEKSSIPIPTIIVKAPSTSSSGRS
SQGSSVEADAPASGDTDEAKTPHGPPPSTPAPQPPAPPSIPAPPPPSLPSIRAQDNLDFT
SQFGAAIVGAARRDRERFHEARKKSASLFMSAEEDVSLDGLVGVTRTQVSQQQLNTQAES
SSTRLRPSKSIDEGMFSGDTFIHHTRSMPPAFGLPEYSSPALDYQPKSVPTDLYTAAGRQ
PAPSTTTTFIHPLTGKALDPTSPLGLALAARERALRDDSRLRRGTEHHFSRQMSSVVFPS
STVTSQPVSSAAQSSSSSYLVTSSSLAATTPTVGRPPSPRILRGVGSVWGEEGGGGERER
EGGGAREGLRVRFSEDKTVHTHHYQSQPTYKERERERSRERERELSRERERDKEREGYMR
RAEQAAANAAAADSSAQQASQSQPPRRPSFLRMESQADAYILSLTPPSPPATSSQQTVNT
TGSTGTGLMVLPPPAPSVDADDEFVYADPLPPPLEFANSFDRGIGGISGYTQHGMLPNSL
TSRQKQVPPPPPPPPPPPPPPPPPPQKEPFISGFPAHTPLPSPQAGDSTASSLTSYDSEV
ANLTQSAPSPSQTSPNPPPPSSPSTLQPTSIAGPPPPPSVSPPPPPGSYHRPFSMSHPHH
LYNSTHTPGRSSPTPPLHTVAPPPAYRGGPTVPSSTAATSAPLRGTASHATTTSCAAITT
AAATTTSTSTQLYQERTHTTHTSSSTPITGSRRTGEHHRPPPATKKGESQETVVDSGIEE
LDSRSSSDHHLDSILALSGAGVRGDRLDRGERGVGAGGRIGGGGGTGESERGGDFLESYM
SYLDGQTFEMQNATAAASTYPKTNRFREGGRVGELHRQTSTAPASFHSHRQRDEQEDDEV
EEGVAEDESGQDGYGVREIQNLGRPTSPYFDRPRTPEMKPLWGEGQMAGDGGSQSGTLLE
GKKIYPPASSMKPSIINELSSKLQQRSKDSWSSQRPLGRHRFSEDSASALSPPSARSQSP
SPISLSQPSLSPSPTPASQYPNWGRSPSPQPQAASQPPRSHSPLSPSSYSPYPTSPKHRP
VYRTKALEFQFIPSRESRKAESHILQRRRAPSPLISPSERPKVGPPRPSSLPLLPTTPLY
SAIYDLRGSITPPSPGNPLGDPYFSPSPPLFAPSGAPPPPNSTLVVSRSLSPTHFLSGTS
SPPLHPLPPPPCLSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLDNE
IDGSHLPSLTKEDYLDLGVTRVGHRMNIERALRSVMDRLSSSPFPISVLSPREGQTERRR
DDGSRS
NT seq
7401 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccgttcagccccctgtccagcgacgaggagcaacaaaggatgctgggaaac
aatcgacatctctatccaggggcagaggacgaggaggaggaggaggaagaagaggaggag
gaaatggaagaagatgagcgtgatgaggacggggaggaggaggagaacggggagctggag
ggggaggaggaagatgatgaagaggagatggtggaggaggtcaggcgaggaggcctgtta
agggggggcagaggtgaaggacacagacagtcaggtaagctggctgcacgacccagcggg
gacagacagatccggccagggaacccgggacacgcggctaacccctattcatccaaccct
ggacccacacaccaacagccagccaatcagatacagcagcagcagcagaggaggctgaag
gagcgcagcgccagctcggtgccatctgaggacgcccacatcgccatgatggtgtttcgc
atcgggatcccggacataaagcaaacgaagtgtttgcggtttaaccccgacgccacagtg
tggaaggccaagcagcaggtgctgtgctcccttaccgaatcactgcgggacgtcctgaac
tatggtctgttccagccggccacagacggccacgatgccaagttcttggaggaggagagg
ctgctcagagagtacccacagtccttcgagaaaggggtaccatatttggagtttcgatac
aagaccagggtgtacaaacagaccaatctagatgagaagcaactggccaaactgcacact
aaggccagcctaaagaagtttatggattatatccaaaccagcgccgtggacaagatggcc
aagttcttagacaagggcctcgatcccaactaccaggacgctgacaccggcgagactcct
ctgtccctggcggtgcagtgtgagccgggtgggggtgaggccatccgggtccttgtggag
ggaggggctcatattgacttccgcgccaaagacgggctcacaccgctccacaaggctgtt
cgaggccaccgccatacagccctgctggtcctgctgtctctgggtgcgtctccagactat
aaggaccggagagggctgacgcctctctaccacactgtgctgacagggggcgacacctcc
tgctgcgaaacactgctttaccaccacgccaagctgggcatcagggatgagaacggctgg
gacgagacacatcaggcctgtcagaatggtaactcacagcatctggagcacctcctcttc
tatggggcggattcctcctcccagaatgcctctggaaacactgccttgcacatctgtgct
ctatacaacaaggaaagctgtgcacgaattctgctctacaggggagcaaataaagacaca
aagaataacagtgggcagaccccctttcaggtggctgtcatgtctggccactttgagctg
ggggaaattatcaaaaaccaccgggatacagatgtggttccttttgtggagtctccaaag
tacgctccccagaggcgggagagcggccggacgctaacaataccccaccctcatcccttc
ctgcgggcaaacagtgacagcagcatgaacctgccagactggatggcagtgcccaacgcc
ccggggaccaatatcgtctctgtgcagggctataagcatactggtaccctgcggagctcc
agcagtcccagaggggcgaggacacgttccccgtccagagggaggatcggagacaaggaa
gaccgtagcaggcagagtcggagacaggggcccgcccctatcaacaccaccacacaaact
gcggggcagcgcagacgcctctacagcgccgtcccgggacgagtctttgtagccactcga
gcacactctgcacagggagagcgagaaatcagcttcaacaagggagacagggtcaaagtg
ctgagtgttggcgagggcggctactgggaggggacggtaaggggtcgcacaggctggttc
ccctccgactgtgtggaggaagtgatgcttcgaagccaagacaacagatcagagagccgt
ggagagcgagccaaaaggctgttccgccattacacggtgggatcctacgacagcttcgac
gctcccagtgactacataatcaaggagaagacagtgcttctgcagaaaaaagacagcgag
ggattcggctttgtgctgagaggggccaaagctcagactcctatcgaggagtttactccc
accccggccttccctgccctgcagtacctggagtcagtggacgagggaggtgtggcctgg
agagccggtctcaggatgggggatttcctgatagaggtcaatggtcagaatgtggtgaaa
gttggacaccgacaggtcgtcaacatgatccggcaaggtggcaacagcctcatggtcaag
gttgtcatggtaacccgcaaccccgacatggatgacggttcgaggaagaaaattccccag
cagagtaagaggctgagcactccggctatcgccctgcgatccaaatccatgacttcagag
ctggaggagatggtggagagagctgctaccccttggaaaaaaaaatcagaattcgaatct
tcacaagttacagagaagaagaggacagtctatcagatggctttgaataaactagatgaa
attcttgcagcagctcagcagacaatcagcaccaacgatgcgccggggacacggggacag
gggccaaaaagagaaagagggcgaagtttctatggcaatgagccaaattacggggatcag
tccgggatggggatgatgtcatcagggttgagccttggctatgaccgtggacagcacacc
tcaggtcacgccccacagcacggtatgctgcggcagaagtccatcggggtgcctgaggag
gagaagcagttcctgcatcctccaaccatgaagtttgcccgcagtctgtcggtgcctggc
ccagacgacatcccccctcctcccaccactgccccaccagaccctccattctcctctgct
ccgccactaggttggagagctaagtcatctcagcagccctctgtctccgtgtcccagtcc
acatccacctctgcacactaccagccctactcccagtcagtgcacttcacccatgggggc
agggagagggcaggtggtccaaccactggccccagtggtggagcggcagaccacacaacc
tcgtatgcacatgcagctgcccacactgctcaaagcaggactgcttcgcggaaggtcgcc
tatactggggagcctgttggagctggcatcggagctggtggaggggctaaggcagccggt
ctcaggaggggctacagtaccgccgtccccccatccagcattgccactgtaatgccccag
caacaacagactacccagagtcaaccccagcgagtagaccgcagtgcagccggggctgga
gcagggggtcctaaaggaggtgcccggagaggtaagggccccctggtgaagcaatccaag
gtagaggacctgcgcatgggccaaggtacactggggggcaagggctcagtggagaaaagc
tccatccccatccccaccataattgtcaaggctccttcaaccagcagcagtggacgcagc
agccagggcagcagtgtagaggctgatgctcctgcatcaggggacacagatgaagccaaa
actccccacggtcctcctccctccactcctgctccacagcctcctgccccgccttccatc
ccagcaccgccacctccctccttgccttctatccgagcccaggataacctggactttacc
agccagtttggggctgccattgttggcgcagctcgcagggacagggaacggtttcatgaa
gcccgcaaaaagagtgcctccttgtttatgtctgctgaggaggacgtgagtcttgatgga
ttagtaggagtaacaaggactcaggtgtcacagcaacagcttaacacacaggctgaaagt
tcatcaacacggctgcgcccgtccaaatctattgacgagggcatgttctctggggatacc
tttatccatcacacccgcagtatgcctccagcctttggtctacctgagtactcttcacct
gccctggactaccagcctaagtctgtccctactgacttgtacacagcagcaggcaggcag
ccagcaccctccactaccaccacctttattcaccctctgacaggaaaggctcttgacccc
acatcgccactaggcctcgcactggctgccagagagcgtgctctgagggatgatagcagg
ttaaggaggggaacagagcaccacttcagccgccagatgtcgagtgtggtgtttccttca
tctacagtcacctctcagccggtgtcatctgctgctcagtcctccagctcttcctacctg
gtcacctcatcttctctggctgccactacacccactgttggtcgcccaccctcaccaaga
atcctcagaggagttggcagtgtgtggggtgaggaaggcggtggaggagagagggagcgg
gaaggaggaggggctcgcgaggggctaagagttcgcttctcagaagacaaaacggtccac
acgcaccactaccagtctcagccaacctacaaggagagggagcgggagagatcgagggaa
cgggagagagagctgtcgagagaaagagaaagagacaaagagagagaaggttacatgagg
agggcagagcaggctgctgcaaatgcagcggctgctgatagctctgctcagcaggcgtcc
cagtctcagccgcctcgtaggccctcttttctcaggatggaaagtcaagctgatgcctat
atcttgtccctcacccctccgtctcctccagctaccagttctcagcagacagtgaacact
actgggagcactgggactggcctgatggttcttcctccccccgccccctcagttgatgca
gacgatgagtttgtctacgcagacccactcccacctccattggagtttgccaacagcttc
gacaggggaatagggggaatatcagggtacacacaacacgggatgctccctaacagcctg
acctcccgccaaaagcaggtaccaccccctccccctcctccccctcctcccccaccacca
ccccctccacctccccaaaaagaaccatttataagcgggtttcctgctcatacacccctg
ccctcacctcaggcaggggactccaccgcctccagcctcacttcttacgacagtgaggtg
gccaatctgactcaatccgctccttccccctcccaaacgtcacccaaccccccgccccct
tcctcaccctctaccctgcagcccacctcaatagcgggacctcctcctcccccgtcagtc
tcaccaccgcctcctcccggatcctaccacagacccttctcaatgtcccacccccaccac
ctttacaacagcactcacactcccgggcgctcttctcccacacctcccctgcacacagtc
gcgcctcccccggcctaccgcggtggtcccacagtgccctcctccactgctgccacctct
gctccacttaggggcactgcctcccatgccacgaccactagctgtgccgctataaccacc
gctgctgcaaccacaacaagcacctccactcagctctaccaggagcgaacacataccaca
catacatcatcctccacccccatcacgggcagtcgtaggacaggggagcaccaccgtcct
ccccctgctaccaagaaaggagagtcccaggagacagtggtggactctgggattgaagag
ctggacagccgcagcagcagtgaccaccacctggacagcatcctagctctaagcggagct
ggtgtccgaggtgacaggcttgaccgaggggagagaggagttggagctggtgggcgtatc
ggagggggaggcggaacaggggaatcagaaaggggaggagattttctggagtcttacatg
agctacctggatggacaaacttttgagatgcagaatgccacagcagcagcctccacctac
ccaaaaaccaacaggtttagagagggaggtcgcgtcggggagctacacagacagactagt
acggcccctgcctccttccactcccacagacaaagagacgagcaggaagacgacgaggtc
gaggagggagtggcagaggatgagagtggccaggatgggtatggggtgagggagatacag
aatttgggacgtcccacttcaccatactttgatcggccacgcactcctgagatgaagcct
ctctggggcgaggggcaaatggccggtgatggaggcagccagtctgggacacttttagag
gggaagaagatttacccaccggcatccagtatgaagcccagcatcattaatgagctgagc
agcaaactgcagcaaagaagcaaggacagctggagcagccagagacccctgggcagacac
agattttcagaagactcagcctcagctctgagccccccctcagctcgatcccagtccccg
tctccaatctcgttgtcacagccatcactgtccccatcccccacacctgcctcccagtac
cccaactggggacgatccccgtctcctcagcctcaagcagcctctcagcctccacgttca
cattccccgctgtccccgtcatcttattccccttaccccacctcccccaaacacagacct
gtctaccggaccaaagccctagaattccagttcatccctagtcgcgagtcccgtaaagca
gaatcacacatactccagcgtaggcgagcacccagccccctcatttccccgtcagagagg
cccaaagtgggcccaccacgtccatcgtcccttccgctcctccccaccacacccctatac
agcgccatctacgacctacgaggttcaataacaccgccgtcacctgggaaccctcttggt
gatccttacttctcgccctctcctcccctgtttgccccctctggtgcccctcctcctcca
aattccactttagttgtgtcacgatccctctctccaacacacttcctgtctgggacctct
tctccacccctgcatcctctccctccacctccctgcctgagttacccccacctaccgccc
ccttctcctacgaagccgtttgcctccaagccgctgccctactggaccaagtacgacgtt
gcggactggctaggatacctgaacctgggtgagcaccgagagcgtttcctggacaacgag
attgacggcagccacctgccctctctaaccaaggaagattatctggacttgggtgtgaca
cgcgtgggccaccgcatgaacatagaacgggccctgaggagtgtaatggacaggctgtcc
agcagcccatttcccatttctgttctctcgcctcgggaaggacagactgagaggaggagg
gacgacgggagtcggagctga
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integrated database retrieval system
