Xiphias gladius (swordfish): 120805146
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Entry
120805146 CDS
T07311
Symbol
ttc37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120805146 (ttc37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120805146 (ttc37)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
120805146 (ttc37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_14
TPR_8
TPR_11
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_Slam
ARM_TT21_N
Fis1_TPR_C
TPR_15
HemY_N
Loricrin
YceG_bac
Motif
Other DBs
NCBI-GeneID:
120805146
NCBI-ProteinID:
XP_040010998
LinkDB
All DBs
Position
LG19:complement(18722165..18738621)
Genome browser
AA seq
1570 aa
AA seq
DB search
MSSKEMKTALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQSQ
SAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKVELPNVYQKLVELYASSDKNKCYEVLK
KLSDIYQSDKEYLKLAKVWLQLIQLKEDDGADKNELLQLWQQMTQLLSDCLNEERQDNET
QQHLITAFENAMVLIDPIPGEKHKKISVDYLKCLSKLPQEEAKIKKACESMLSHYPNQSY
PLEVLCSHYLKTGILNEDTVGCFSQLLDLAPNCGLGHLGLGTKALQEGRYKDAIKDLSQG
LKKMSCSTGWYSLAEAQFKMHRYSDSTTSCSQGLMMCVAGDNELRVKLLRLKLGTLVRNG
GEKAAGQALETFSKIPDAEKDPVLVALKGWAYLNKGQTDQALKVSLELLASNPNLAQGLA
LRGLVHLAEGQQQLAEQSFLKAATQSQNCGEYYFLLGQLYWDMGEETRKDRSKAHTHLLK
AAKLDPHLGCVFRYLGHYYREIANDRGRARGCYKKAFELDNEDAESGTASVDLSMEQEDM
DTALATLQSVIEKATPGSAKWAWMRRGLYYLKVGEHQQAIADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQAIQNLFTAVELRPDLSCLWKLLGDACT
AVSTVSPNRAQVLVPAPLAGLDPNTQSHMLNQAQALKVGERCYAHALKLMSEVPSLWYDL
GVNYYRQASLPCPTEGDQNSQSLVLEKAQQCLKKAIMMDSGNRGYWNALGVISMNKGLEN
FSLAQHCFIKSIQVEPNNVVAWTNLGTLYLKKDNIELAHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYCYNIVQMNAI
SAAQVALSKYTERIQSDPEAFIMLGYLNEHLQLKRQALQAYQRAVELLQSMSSTEELAFA
LGNYGRALCTSGQWEDAVHVYNSTPLQELSDLAGLALAYCRAGLIPESIIAYERALAVAS
SEKEKAYILTALALLQHRQGNLDSAKTLLFKCSMLKEPISESLLCLCALGLVHGDVTLAA
AALTELLKKGSASGSVVEQRCLLTCTLLALQGNYSAVQREASRAVHSNPGNPSLWALLSR
VVPQYYPRKANGGAMAGHVACLSSMTQGKRALLYSGLNQLAGGRHSGEDSNRNALKTMQR
AVVLCPDDPAAWAGLMAACQTENTSCYLSGSAPCRQGLEKTLMSVVSEKVRSVEEIERPL
AQTLEGWVLQQAVTGLVLGGQLEQAEALCSQVLNVSPEHPAVMLSLRQVQCQRLLVANDG
TALPDSVLEQLNNTVMMNSTNVGAWHWLAEVYRSQGLLVQAVMAYRKSLQLASQLGLHSS
QVASLLRLALLALGPCMAGIPGNEWKDLVLEATTEVLKLGSSPMAHLFQALLQYVTKMGA
RETRRLLERLVYVSSQDFPATVVQVASWYLLRHLHAKNDEELMNVLLQHAKMKGDQRLLE
FNSLLASSSS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaaagaaatgaaaacagccctgaaaagtgccagagaggccattaaaaacaaa
gagttcaaagaggctctaaaacactgcaaggctgttttgaaacttgagaagaacaattat
aatgcatgggtattcatcggcttggcggccagtgaactcgagcaaccagatcagtcacag
tcagcctacaaaaaggcagtggagctggagcctgagcagctactggcatggcagggctta
gctaatctttacgagaagaccgatcagtgggacttcaaagttgagctacctaacgtttat
cagaagcttgttgagctgtatgccagctcagacaaaaataaatgttatgaagtgctcaaa
aagctgtcagatatttatcagtctgacaaagaatatttaaagttggcaaaggtttggctg
cagctcattcaactgaaggaggatgatggtgcggacaagaatgagttactgcagctatgg
caacagatgacccaactcctctctgactgtcttaatgaggaaaggcaggacaatgaaact
caacagcatttaatcacagcatttgagaatgccatggttctcatagaccctataccagga
gagaaacacaagaagatctcagttgactatttaaaatgtctttctaaactgccacaagaa
gaagccaaaataaaaaaggcttgtgagtccatgctgtcccactaccccaaccaaagttat
cctcttgaggtcctttgttcccattacctcaaaacaggtatcctgaatgaggatacagtt
ggttgtttctctcagctcctggacctggcgcctaactgtgggttaggtcacttaggtctg
ggaaccaaagcacttcaggaaggaagatataaagatgccattaaggatctttcacaaggg
ttgaagaaaatgagctgcagtacaggatggtacagtctggctgaagctcagtttaaaatg
cacagatactcagacagcactacatcttgctcccaaggtctgatgatgtgtgttgctgga
gataatgagctgagggtcaaactgctcaggttgaagctagggacattagtcagaaatgga
ggagagaaggctgcaggccaggctttggagaccttttcaaagattccagatgctgaaaaa
gacccagttctagtagcccttaaaggatgggcataccttaacaaagggcagactgatcaa
gcacttaaggtgtcattagagctactggcctccaacccaaacctggcccaaggtttagca
ttgagaggactggtacacttagctgagggccagcagcagctggcagagcagagtttcttg
aaggcagctacccagagccaaaactgtggagagtattatttcttgctgggacaactctac
tgggacatgggagaagagacccgtaaagaccggagcaaagcccatacacacttgctgaaa
gctgcaaagttagatccacatcttggctgtgtgttccgctaccttgggcattattaccgg
gagattgcaaatgatcgtggccgagcacgaggctgctataagaaggcctttgagttggac
aatgaagatgctgagtctggaactgcctcagtggatctaagtatggagcaggaggatatg
gacactgcattagcaacactacagtcagtgatagagaaagccactccaggctcagctaaa
tgggcctggatgagacgaggcctatactacctcaaggttggagagcatcaacaggccata
gctgatctgcaggcagctctgagagcagaccccgaggactgggtgtgttgggagtgttta
ggtgaggcctacctaaaccgccggagcttcacagcggctctgaaggcctttggtaaggcc
catcaacttcagccctcctccatctacagtgtttaccaggctgctgcaatcaaacagacc
ctaggcaagttcaaagaggcggtcgcagagtacttgcagatcactgcacagcaggactat
gttcctgctcttaaaggtcttggagagtgccagctgtctctggcaaaaagtttaatggag
gactgcagagatgggggagccattgacctcattcagcaagccatacagaacctcttcaca
gctgtggagctgcgtccagacctgtcctgtttgtggaagctgctgggagacgcatgcact
gcagtcagcactgtgtcgccaaacagagcacaggttttagtgcctgccccgctggctggt
ttagaccccaacacacagagccacatgctgaaccaggcacaggcactcaaagtcggagag
aggtgctatgctcatgctttaaagctgatgtctgaggtccccagcctttggtatgaccta
ggagtaaactattaccgccaggccagcctaccctgccctacagaaggagaccagaactcc
caatctctggtcttagagaaggctcaacagtgtttgaaaaaggctataatgatggacagt
ggaaaccgcggctactggaatgccctgggagtcatttccatgaacaaaggtcttgaaaac
ttttctctggctcaacattgcttcatcaagtccatacaagttgaaccaaataatgttgtt
gcctggacaaaccttggtaccctgtatttgaagaaggacaatatagagcttgcacatgag
gccttcaagattgcccagtccttggagccactgtatgtcaactgctggattggacaggca
ctgatagcggagagagtgggaagctatgacaccatggatcttttcaggcacaccactgaa
ctcagcacacatatggagggagtgaaaggttatgcctactgggtatgttcgaccctgctg
gataagagcaacagagactctgaactgtactgttacaacatagtccagatgaatgccatc
tctgctgctcaggtggcactcagcaagtacacagagaggatccagtctgaccctgaagcc
ttcattatgctgggctacctgaatgagcatttgcagttgaagaggcaggccttacaggct
taccaaagagctgttgaactgctgcagtccatgtcctcgacagaagagctggcttttgct
ctgggcaactatggccgtgctttatgcacctcaggccagtgggaggacgcagtgcatgtt
tataattccactccactgcaggagctcagtgatctggccggactggctctggcatactgc
agggcaggactcatcccagagagcatcatcgcctatgaacgtgccttggctgtggcttcc
agtgagaaggagaaagcgtacatcttgacagctctagccctgctgcaacaccggcagggc
aacctagactcagccaagactttgctgtttaaatgctcgatgttaaaggagccaatctca
gagtctctgctgtgtttatgtgccctggggttggtccacggtgatgtcacactagctgct
gctgccctgactgagctgctgaagaaaggttcagcctctgggagtgttgtagagcagcgg
tgtttactcacctgcaccttgctggccttacagggtaactacagtgcggtgcaaagagag
gcttccagagcagtacacagcaatcctggaaacccatctctgtgggccctcctgtccaga
gtggtaccacaatactaccccaggaaggcaaatggtggagcaatggctggtcatgttgcc
tgcctctcaagtatgacccaaggaaagagggcgctgttgtacagtggactgaaccagctg
gcaggcggaagacactctggagaggacagtaacaggaatgcattgaagactatgcagaga
gctgtggtgctctgtcccgatgatccagcagcatgggcgggattaatggccgcctgtcaa
acagaaaacacatcctgctatctttcaggttctgcaccttgcagacaaggactggaaaaa
acactcatgtcagtggtttctgagaaagtgcgtagtgtggaggagatagagcgcccccta
gcccagactttagaaggctgggtactacaacaggcagtgactggtctcgtgctgggggga
cagctggagcaggcagaagccctctgttcacaggtgctgaatgtttccccagaacaccca
gcagtgatgctgtcactgagacaggtgcagtgtcagcgtctccttgtggccaatgatggt
actgccctcccagactctgtgctggagcagctcaacaacacggtgatgatgaactccacc
aacgtgggggcatggcattggctggctgaggtgtatcgtagtcagggtctgttggtccag
gcagttatggcttacagaaagagtctccagcttgcctcacagcttggcctgcacagcagc
caggttgccagcctgctccgactagccctgctagctctaggaccctgtatggcaggtatc
ccaggaaacgaatggaaggacctggtactagaagccactactgaggttttgaagctgggt
tcctcccctatggcccacctcttccaggccctgctacagtatgtgaccaagatgggagcc
agggaaacaagacgcttgttggagaggctggtgtatgtttcctctcaagacttcccagcg
acagtggtgcaggtggccagctggtacctcctcagacacttgcatgccaaaaacgacgag
gagctgatgaatgtccttttgcaacatgccaaaatgaaaggagatcaaagactactagag
tttaattcactgctggcctcttcttcatcctga
DBGET
integrated database retrieval system
