Xiphias gladius (swordfish): 120805147
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Entry
120805147 CDS
T07311
Name
(RefSeq) LOW QUALITY PROTEIN: synphilin-1
KO
K04558
synphilin-1
Organism
xgl
Xiphias gladius (swordfish)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_2
Ank_4
Ank
Ank_5
Ank_3
Lzipper-MIP1
23S_rRNA_IVP
Motif
Other DBs
NCBI-GeneID:
120805147
NCBI-ProteinID:
XP_040011002
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All DBs
Position
LG19:1140359..1168572
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AA seq
943 aa
AA seq
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MEAPEYLDLDEIDFSDDSVYSVTSLKSIPELSRRSDGHAEERPAPAINWSXGVSSHSGGG
IKPTGLAEVHSKFRPVKRVSPLKHQPETTESDSDGKVQGQGPGLGEPGEGSKDDPSSDKP
THASTSSDGPGGKMKSLGGSGGVVGGSNPQGLFGELEHYDLDMDEILDVPYIKSSQQMST
LPRVPHDKRSVTGSNLGGGTLERNRGGGLKNSALSHNEPLGLGSGSSQTQYCVLSPVKWS
DLRKSKSMDPDLHHLHRSPAGGYQPELLSSGLLSCSSSLSSFSDADKLLSARVYQDSQTQ
RPGVEPPGGPGLMYPIPGCSVSRQDGSKPWAPAPGGGGAGGGGGPRGFGGGGGPGAELDE
ETKKNQNIINIVREGQISLLPHLAEDNLELIRDEDGNNLLHISASQGHADCLQHLTSLMG
EDGLNERNNQQLTPAGLGVKNGHLECVRWMVSETEAIAELSCTREHPSLIHYAARYGQEK
VLLWLLQFMQEQAISLDEVDQNGNTAVHVAAQYGHLTCIQTLVEYGSNVTVQNQQGERPS
QSAERQGHTTCARYLVVVETCMSLASQVVKLTKQLNEQATERMALQKQLQRLMDPNKAEG
TPSRSPSSHQPSVEAWPEMMLTAEGTPGDGHWLVRQGGVGQDSVLRQLLGKDVSDTLCPR
ERLPLSGGPSGPGAPGAPGAPGARRTGLVERRELKLARLKQIMQRSLSESDSDGYPPEEG
KNQGAPPPNTLRPDRPYHLPITEEEPVSNHLHLMMRKHLPTSSSSSSSAEKKQAFSLNGS
KSVDSVGYNPSPTSSDPEATDGKTPDTSSDPHDAANGQKVATSPKSALKSPSSRRKTSQN
LKLRVTFDEQIHKSSSQEAEPTKGHHGKERTPTGSSESKRPFGTFRSIMETLSGNTNHNN
NNNGGGQSGSAVKPPTCQNSPGRKSESKSSPGGAKGKSKTSNV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcctgaatacctggacctggatgagatcgacttctctgatgattcagtgtat
tctgtgacgtctctgaagagcatcccagagctgtccaggaggagtgatggtcacgctgag
gagagaccagctccagccatcaactggagtnncggggtttcctcccacagtggcggggga
attaaacccacggggctcgctgaggtccacagtaagttccggccagtgaagagggtctcc
cctctcaaacaccaaccagagacaaccgaatcggactctgatgggaaagtccagggtcag
gggccgggtctgggggagccgggggagggcagtaaagatgaccccagctctgacaagccg
actcatgcctccacctcctctgatgggccaggggggaagatgaagagcctgggcggcagc
ggtggtgttgttggagggagtaaccctcagggcctgttcggggagctggagcattatgat
ctcgacatggacgagatcctggacgtgccttatatcaagtccagtcagcagatgtccacg
ctgcctcgcgtccctcacgacaagcgctctgtgacggggagcaacctgggtgggggcacc
ctggagaggaaccggggaggagggctgaagaactccgctttatcccacaacgagcctctg
ggcctgggcagcggcagttcacagactcagtattgtgttctgtctccggtgaagtggtcg
gacctgaggaagtccaagtcgatggatccagacctccaccacctacaccgctccccagct
ggaggttaccagccggagctgctctcctccggactcctcagctgctcgtcctccctctcc
tctttctccgatgcagacaagctgctgtctgcgcgcgtctaccaagactcccagacccag
aggcccggtgtggaacctccagggggcccggggctgatgtaccccattccagggtgcagc
gtaagcaggcaggatggctccaagccctgggctcctgcacctggaggaggaggggcgggc
ggaggtggcgggccgagggggtttggtggaggcggaggaccaggagcggagttggacgag
gagactaagaagaatcagaacatcatcaacatcgtcagagagggacagatctcactgctg
cctcacctggcagaagataacctggagctgatcagagacgaggatgggaacaacctgctg
cacatctcggcctctcagggtcacgctgactgtctgcagcatctcacctctctgatggga
gaggacggcctcaacgaacgaaacaaccagcagctcacccctgcaggcctgggggtcaag
aacggtcatctggagtgtgtgaggtggatggtgagtgaaacagaggccatcgctgagctg
agctgcaccagagaacatcccagtctgatccactatgctgcccgctatggacaggagaag
gtcttgttgtggttacttcagttcatgcaggaacaggcgatctctctggacgaagtcgac
cagaacggaaacactgcggtccatgtagcagctcagtacggacacctcacctgtatacag
actctcgtggagtacggctctaacgtgacagtccagaaccagcagggggagcggccttcc
cagagcgccgagcggcaggggcacactacctgcgctcgatacctggtcgtcgtggaaacc
tgcatgtcgctggcctcacaggttgttaaactcaccaagcagctcaatgaacaggcaacg
gagaggatggctctacagaaacaactgcagaggctgatggaccccaacaaggcagagggg
acgccttcccgatcacccagctcccatcagccctcagtggaggcgtggccagagatgatg
ttgacagcggagggaactccgggtgacggtcattggttggttcgtcagggaggggtgggt
caagactctgtgcttcggcagctgctggggaaggacgtgtcggacacgctgtgtccaagg
gagaggctgcctctgtcaggtggcccctctggccctggggcccctggtgcccctggtgcc
cctggtgcccgtaggacggggctggtggagagaagagagctcaaacttgccagactcaaa
cagatcatgcagcgctctctcagtgaatcagattcggatggttatccaccagaggaaggt
aaaaatcaaggagcaccgcctccaaacaccttgcgacccgataggccgtaccacctgcca
attacagaggaggagccggtatcaaaccaccttcatttaatgatgaggaaacacctcccc
acatcctcctcctcctcctcctcggctgagaagaagcaggcattttctctcaatgggtca
aagtcagtcgacagtgtcggttacaacccctcccccacctccagtgaccccgaggccaca
gacggcaaaacaccagacacctccagcgacccccatgacgccgccaatggccagaaagtc
gccaccagccccaagagtgccctgaagtctccctcgtctcgcaggaagacgtcccagaac
ctcaaactgagggttacctttgacgagcagatccacaagagctccagtcaggaggcagag
ccaaccaaagggcatcatgggaaggagaggactccaacaggaagctctgaaagcaagcgg
ccgtttgggacgttccgctccatcatggagacgctgagcggaaacacaaatcacaacaac
aacaacaacggtggtggtcagtcaggctctgctgtcaaaccgcccacctgtcagaactca
cctggcaggaagtcggagagtaagagcagcccgggaggagccaagggcaagagcaaaacc
agtaacgtttaa
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