KEGG   Xiphias gladius (swordfish): 120805315
Entry
120805315         CDS       T07311                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
xgl  Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xgl04121]
    120805315
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120805315
Ubiquitin system [BR:xgl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    120805315
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120805315
SSDB
Motif
Pfam: UBAP2-Lig GIP1_N UBA_RAD5A UBA_4 Methyltransf_32
Other DBs
NCBI-GeneID: 120805315
NCBI-ProteinID: XP_040011389
LinkDB
Position
LG19:complement(14633541..14650154)
AA seq 1202 aa
MMTSLVSNQARGTRDRTLPTTTQTTQPQKQIQATAEQIRLAQMIYDKNDADFEDKVKQLI
EVTGKTQDECMVALHDCNEDVNRAINFLLESNSDTNSWETVGKKRNLGKEGGPSEIKESR
EKKGGGEREASRGRGGSNRRGRGISRGREGRLEENGFEVAPGERGGDRGRRGRGRGAGVR
GRGRAAAGTRFSSQGMGTFNPADYSANSGARQETWEGDANEPAEGTGTWGGNLEDWTSED
WNEDLSETKVFTASSAPGNHITPGHNVDLASLLPKAGGAAGGSMDSDLGVIVDGPSAEDL
GQSLVFTNSHHNGRTATHSYAHATANSYAHAASASTTYAHAALSSVLGSGFGSLNAAKPT
PASDIRTSEQLNGPRLGQRASQTLATTTSSSSVSKDTGPPSMQSPAPASSPSVDIKAQRM
DNGPVTAQLSEMKLQPEPSAVLSQLAQRQQQSTILPTTESLGLSQSHAPQVPTPPGHDSS
VPPVRDGASPGVKLPGMEPPITEPPQRQLKTQRRRVPPPSKIPSSAVEMPGSADISGLNV
QFGALDFGSEAGSGTVDMAQMELAREQAPAQAPAPAPLSVPTAVPTQQPQSSLFSKPGTV
SEHMSSLPSLPSAVSDPSFPSPSLGLPSATPSPSLGLPSAAAPPSSAAPTAASRVESSSG
PRSLPPHLGFSQSKDVTSAAGGPLTNGYSGMKTPSTQDTTSSTSRTVKTESPVMTSDSGS
GHPIPSPAVTPSHSTPIPALSSHVTSTHSSGSALATSSSLTISNDESSSGSSSGNLHAFS
SSSSSQVVNPSASVPLAVSSSNTNGLHPSGAPGLTPNGTNTTLSASGSRTAPLLTTTSGK
APPNLAQGVPPLLANQYIMGPGGLLPAYPQIYGYEDLQMLQSRLPMDYYGVTFPGTTAAM
PGRDGLTNNPYSGEATKFGRNDSSSPAPPTSLSTAGVQSQPQQAPQAGTQGQGTGQSQAQ
QTQNQAFLNPPLPPGYGYTGLPYYAGVPGVPSAFPYGPTVFVPPASAKQPAMGLANPSNQ
YHQQHQPSYGQHAYGTAFDDLSQAHAGEYSKGGYGGSAQSQAKSAGSGPGKDDSTVKSVL
EKAPGLSGSGTSGGVPDMGGSIYSKTQSFDKQGFHTGTPPPFSLPSALGGTGPLNPGGAP
GYAPAPFLHILPPHQQPHSQLLHHHLTQDGQGGPGQRSQSSSMQQKTQGSKSSYGSSPYW
AN
NT seq 3609 nt   +upstreamnt  +downstreamnt
atgatgacttcactggtcagcaatcaagcccggggaactcgggacagaacgctgcccacc
accacacaaacaacacagccacagaaacagatacaggccacagcagaacagatacgttta
gcccaaatgatctatgacaaaaatgatgctgactttgaagacaaggtcaaacagctgatt
gaggtaactgggaagactcaggatgagtgcatggtagccctccatgattgcaatgaagat
gtaaacagagccatcaattttctgttggagagcaactctgacacaaactcctgggagact
gtggggaagaagcggaaccttgggaaggaaggaggaccctcagagataaaggaaagtagg
gagaagaaaggaggaggagagagggaggccagtcgtggacgtgggggctccaacaggagg
ggcagaggcatcagccgaggtcgtgaaggtcggttagaggagaatgggtttgaggtggct
cctggagagagggggggtgaccgtggacgcaggggacggggcagaggggcaggggttcgc
ggtagaggaagagcagctgctggcaccaggttctcctcccagggaatgggcaccttcaat
cctgctgactactcagctaactctggagctcgccaggagacatgggaaggggacgccaac
gaacctgctgagggaactggaacatggggaggcaatctggaagactggacttcagaagac
tggaatgaggatctgtctgagaccaaagtattcactgcctcttctgctccaggaaaccac
attacacctggacacaatgtggacctggctagcctactgcctaaggctggaggggctgca
ggaggttccatggattctgacttgggggtaatagtcgatggcccctcagctgaggatttg
ggccaaagcctggtttttaccaattcccaccacaatggacgcactgcaacacacagctac
gcacacgccacagccaacagctacgcccatgccgcctctgctagtaccacctacgcacac
gctgcactgtcctcagtcctgggttctggttttggctctctgaatgcagctaagccgacg
cctgcctctgacatcaggacatcagaacagctcaatgggcctcggctaggtcagagagcc
agtcagacgttagccaccaccaccagcagcagtagtgtttccaaagacacagggccacct
tcaatgcaaagtcctgctcctgcctcctctccctctgtagacatcaaagctcagagaatg
gataatggcccagttactgctcaactctcggagatgaagcttcagccagagccatcagcg
gtgctcagccagttggctcagaggcaacaacaatccaccatccttcctaccacagagtct
ctgggcctctctcagtcgcatgcgccacaggtccccacaccaccaggtcatgattcatcc
gtccctcctgtgagagatggagcttctccaggagtgaagctgccgggcatggagcctccc
atcacagaaccccctcagcggcaactaaagacacagagacgcagagtacctcctccctca
aagatcccgtcatcagcagtggagatgccaggctcagcagatatatcgggcctgaatgtt
cagtttggagctcttgactttgggtctgaggctggtagtggaacagtagacatggcacag
atggagttggccagggaacaagcccctgctcaggccccagctccagcgccattgtctgtc
cctactgctgttcccacacagcagccacagagcagcctgttctctaagccaggaactgtg
agtgaacacatgagcagcttacccagcttaccctcagccgtatcagatcccagcttcccc
tcaccatctttgggcttacccagtgccacgccctcgccctccctgggtcttcccagtgca
gccgctccaccctcctctgcagctcctaccgcagccagccgcgtggagagcagcagtggc
ccaaggtccctgccaccgcatcttggcttctctcagagcaaagatgttacatcagctgct
ggtggacctctcacaaatggctacagtgggatgaagacaccgagcacacaggacactacg
tcatcaacgtctagaacagtgaaaacggaatctcctgttatgacgagtgacagtggctcc
ggtcaccccatcccttcccctgcagtcacaccttcccattcaacccccatccctgcgctc
agtagtcatgtgaccagtactcactcatctggatcggcccttgccacaagttcctcactg
acaataagtaatgacgagagcagtagcggtagcagcagtggcaacctccatgccttttca
tcatcatcgtccagccaagttgtcaatcccagtgcttcagtccccctggctgtcagcagc
tcaaacaccaatggtcttcatccatctggagcacccggactaactcctaatggcacaaac
accacactgtcagcttcgggcagccgcacggcacccctgctcactaccacctccggtaaa
gctcctcccaacttggcccaaggagtgccacctctcctggcaaaccagtacatcatgggc
cccggtggcttgctccctgcttacccacagatttatggatacgaggacttgcaaatgctg
cagtctcgccttcctatggattattatggtgtaacattccctggtactacagctgctatg
cctggaagagatggcctgaccaacaatccatattctggtgaggcaacaaagtttggtagg
aatgactcttcttctccagctccaccaaccagcctgtctacagctggggtgcagtcgcag
ccccagcaggcaccacaggcagggacacaaggtcagggcacgggacagagccaggctcag
cagacacagaaccaggccttcctaaaccctcctctgccccctggctacggatacactggt
ctgccgtactatgctggtgtgcctggggttccctcagccttcccgtatggccccaccgtc
tttgtgcctcctgcttcagccaaacaacctgcaatgggcctggccaacccctccaatcag
tatcaccaacagcatcagcccagttacggacagcatgcatatggcacagcctttgatgac
ctgtctcaagcccacgctggggaatacagtaagggagggtatggaggctctgctcagtca
caggccaagtcagcgggcagcggcccagggaaagatgattctacagtcaagagtgttctg
gagaaagcaccaggactgtcagggtcaggtaccagcggaggagtacctgacatgggaggt
tcaatctacagcaaaacacagtcatttgataagcagggcttccacacggggacaccgcct
cccttcagcctaccttcagcgctcgggggaacagggcccctgaaccctgggggagctcct
ggctacgcccctgctcccttcctgcacatcctgccaccgcaccaacagccccactcccag
ctcctgcaccatcacctcacacaggatggacagggtggtcctggacagcgcagtcagtcc
agtagcatgcagcagaaaacccaaggcagcaagtccagctacggcagctctccctactgg
gccaactga

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