Xiphias gladius (swordfish): 120805324
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Entry
120805324 CDS
T07311
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120805324 (vps13a)
Membrane trafficking [BR:
xgl04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120805324 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
120805324
NCBI-ProteinID:
XP_040011405
LinkDB
All DBs
Position
LG19:complement(14430720..14470576)
Genome browser
AA seq
3278 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLTNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYNQSVEATLDGVYLLIVPTASIKYDAEKEEKQLQEARQRELQRIEE
TKLKAAEQENPKLEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPDCPLSFGVSLK
NLSLQTADENWNPSLLDENSRLFFKLVRLDNLFAYWNVNSTLFSNHSADKALRCLQSSME
IHSSLPVSHDFIFRPISADAKLQMNPRTDVDFSSPKVDLMVNLSEVAIELNRPQYISILE
LLGSVDMMSRNLPYRKYRPADHVHKNAHLWWKYVITGILEVDVKPRLHMWSWQNIRRHRQ
MVKLYRELYKTKITSKKPSEELLKQLEEPEKTLDIFNITLARQQAEVEVSKAGLRIYRPG
IKMEEEESQGWFSWVWNWGGEADPQTKDVKTGGFDELLTPAEKAKLYRAIGYSETAANPN
LPKDFEDMKVNFHMERLSVSIKDNKDKNEIIRLTVGELNSTLTQRPGAQAIKITAQLSLF
EVTGLASNRPAPTLLSSRKAATGAGTPLLCILFETNPLDERANQRLHVESQPLEIIYDAI
TVNNMSAFFMPPDDLQLDELTNATLMKLEQFRDRTATGLMYVIETQKVLDLKVNLMASYV
IIPQTGFYNGTQNILLLDLGHFKVSSQSRKLLPQLSLSYSNIEDIMSRAYDSFDIQLTSL
QFLYSQPDGDWKMARKQKQSPLHILEPVDLKMDFSRAMVVKDSRMAKYKMSGELPLLSLR
ISDDKLRSVLELVESIPLPESRPSARSTGPSSTPKPKQSFTPQLTPRRPLNLADQRSSLI
FESCETISITSLGSEEDLFYDAPSSPIGDRPFFPDNPMPLRYADLNKRKSLIKEDSQKNM
TDFIMKFEISEFSVQLCRLSGGQEVTVLHLDIEGLGTELKLRTFDMTSNTYLREICLKCP
EYMDSEEKQVQLITTLDNTEVDLLTLEYIKADKNGPEFRSQHNNTEQLIKVTFSSLDVHL
HTEALLNAMNFLNNLLPPSTKKEGGQEELPTIPEEDEAEAEREGEKKEEATVTRKRSSRS
SKFADVVNLHIRADLRCLKVFIRGQKARISEISIEGLVSEVLMRKKEMEVLANLKNIVIL
DCDKDAFYKKAVSIADKEVFAFRMVNYTDATEGDAYLDMSKVDTSVTLTVGCIQVIFLNK
FVSSILAFVNNFQEAKEALAEVTVHAAEKAASGVKELAERSSRIALEVHFNAPVIFLPQS
SSSSNVIVADLGLLSVKNRFSKQPFKSDAKIPPVVDIMTVRLTDLKMYRTTYINEGFQGE
TQLLKPVSLDLKIQRNLSSNWYHSIPDIEITAHLKPMSLILSQDDMIVVLRTLSENLSEK
SDAVPPSASPPTTDPSSDSVSNKESQGSGTTGPASSNTVVTAAIVETQKNSKLKNTLKLD
FKFDSMTLVVYSPNGNEIQPLDSHDEQLKLAEFTLGTISTSVHMFSDSSMKASVRLAACL
LDDKRPRIKMVTPRMMAMRPGAEKNMMVEVNYRQGREGTTLDTVVQDVYLCASMEFLLTV
ADIFLKATQQGFAQVPQHKSSTGAGEKKNINSSVTSKESAAPPAAVTKTEMNVVVRNPEI
VFVADLTRADAPALVMTTQCELLMKSGAEGSQMTAVIKDLKVVACPFLREKRRNNVTTVL
QPCQVFFQSTQSPTTPQAMEVSINALKLKVSPIIINTVITIQSALTPTAETPEELDSPVP
IDLWEKRGWKELKFWFLEEEGDDDTRSLVRLIPQGESLQVTIKSICLTLEAGVGHRTVPM
LLAKSSFHGDVTNWSTLINLHSELNLEVHYYNEVMGVWEPLLEPLEDDTRDGFRPWRLEL
KMKKKPVKYTFLSDEVDYNIPDYKTVIIISSKDQLNITLSKCGLAMLSNLGTAFAEAAKQ
TAECFQKDEAPFVVKNRLGLPVSVRYSEMFCPIGQPSTNCTVKLQDGETLGMDYSTRTDS
DQFSAMTSLSGKDYYIQPTPEGHTSASVIPLIKVGRGMYSVMHKDSGVTRFLVCQIYSVE
GSKYIKIRSPFQIINHFTIPFKVFEGSTCLGTALPTEEFCVPLESYRSELSLQPVTGDDT
DDQVAQFEYSEGFSYEDVSNQQPETRLQQTCRRRGNQDVMMINIVPLKDAVTFKHTGGIG
ENFDVPFVLHLWPSILLRNLLPYPIAYKLKDSGVAAPEAILNPGHSAQLHTAVINKSRLG
LRLLNYFAEDWSAEYSLQSDQEEITFIVFQSLQENDESDGEGTERKTAELDIAVHVKYDR
GQTVIAIHSPYWMVNKTGRLLQYKADDIHRKHPLDYDMPLLFSFKPRYFLKNNKVRLMIS
DSELSDDFSLDTVGSHGDVKCKGRYKDYLVGVKIDASSFSLTRIVTFVPFYMLVNRTKHS
VFICEMGQENWTEAQPEQSGIPFWPENDAKWLKIKVEGCLSPPRTIDFTRPENCLLLHLD
NSVGGIIVDVNLSEHSATIRFSEYHDGAAPFLIINHTKDQTLQIHQSGRTETTWVANELL
DLSFSVEEDSSQKMTEQDELEAEKAVHYTWAEPTGSRELCWKCGTYSGKLKSEEDLREDM
NNEGKLFVISFYEGLQRVVLFTEEKRIYKLLCESEKAQLAEQEIILSLKNMGVSLVNNSN
SQEVSFIGITSSDVVWELKPKKKNRWKTLSAKEAEILENSFKEYMESAPVDNAIVDLENN
FQVSFTPNGMDMRMLQPCDAPLRRHFLPGVKVEYSVSPRQRAYRVQIHRIQIQNQLPGAI
FPYVFYTVKLPKSIAMDSEPKPLTDISIVTRAAGHSDISRIKYFKVLIQEMDLKLDLGFL
YAILDLLTPENASIMSSEQEVELFEKDIEYIKTELNSDSATDTSPISLYEYFHISPIKLH
LSFSLSTGGEDGLKAQRDKELIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELTFQFCTT
QQLQWEVIRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGAIQGPEE
FVEGMALGVKALVGGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRREAMNKQPSGLR
EGLTRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGFGKGLVGAVARPTGGIIDMA
SSTFQGIKRAAETSQDVESLRPPRFIHEDGVIRPYKEREGVGSQMLQKIENGRFAKYRYF
AHAKVNDSDFLMITKRGIFFVTKGTFGQLTCEWQYLFEEFTKEPMIVEDRRLRIEAKERV
KSVFHAKEFGKIINFKTPEIAKWVLAKLEDARESLPKY
NT seq
9837 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaaagcttggtggtagatgtccttaaccggtttttaggggactacgttgtc
aatcttgacagctcacagctaaagcttggcatatggggaggtgatgctgttcttacaaat
cttgaaataaaggaaaatgccttgagtcagcttgacattccttttaaagtgagagccggt
catataggacggctggagcttaaaattccatggaagaacctctacaaccagtcagtggag
gccacactggatggtgtctatctgctcatagtccctacagcaagtataaagtatgatgca
gaaaaggaggagaaacaactacaagaggctcgtcagagggagttacagcggatagaggag
acaaagctgaaggctgctgaacaagagaaccccaagttagagaagcaggacacctttgtg
gaaaaacttgtcactcaggtcatcaaaaacctgcaggtcaagatctctaacatccatgta
cggtatgaagatgatgtcaccaatccagactgtcctttgtcatttggagtatcactgaaa
aacctcagccttcagacagctgatgagaactggaatcccagtcttttggatgagaattcg
aggcttttcttcaagttggttcgactagacaacttgtttgcctactggaatgtcaactca
acactcttctccaatcacagtgcagataaggccttgcgatgtctccagagcagcatggaa
atccacagctctcttcctgtcagccatgacttcatttttcgtccaatctcagcggacgct
aagctacagatgaatcccaggacagacgtagacttctcctctcccaaagtggacctgatg
gtcaatctcagtgaggtggccattgaactcaacagaccccagtacattagcatcttggag
ttgctgggctcagtggatatgatgtctcggaacctgccatacaggaagtacagacccgcg
gaccatgttcacaagaatgcccacttatggtggaagtatgtgatcacaggcatcctggag
gtagatgtgaagccacgtctccatatgtggtcatggcagaacattcgccggcaccggcag
atggtcaaactatacagagagctctataaaacaaagatcacaagcaagaaacccagcgag
gagctgctcaaacaactagaggagccagagaagaccttggatatttttaacatcacattg
gccagacagcaggctgaagtggaggtgagcaaggcaggcctgcgtatttatcgtccaggg
ataaagatggaggaagaggagtctcagggttggttcagctgggtgtggaactggggagga
gaggctgatccacaaacaaaagatgtcaagactggaggttttgatgaactgttaacccct
gctgagaaagccaaactctatagagccattggatacagtgagactgctgctaatcccaac
ctgccaaaggattttgaagacatgaaggtcaatttccacatggagaggttgtctgtgtcc
atcaaagacaacaaggacaaaaatgagatcatcaggctgactgtgggagagctcaattcc
acactcacacagagacctggagcacaagccatcaaaatcacagcccagcttagtttgttc
gaggtcactggcctggccagtaaccggcctgcaccaaccctcctttcatcaaggaaggca
gccacgggagcagggaccccgctgctttgcatcctgtttgagaccaaccctctggatgag
agagctaaccagcggcttcatgtggaatcacaacccctggaaatcatctatgatgcaata
accgtgaacaacatgtcagcatttttcatgcctcctgacgacttgcagctggatgagctc
accaacgcgaccctgatgaaactggagcagtttagagaccgcacagccacgggtctaatg
tatgtgatcgaaacacagaaagttctcgacctgaaggtgaacttgatggcctcctacgtc
atcattccacagactggcttttacaatggcacccagaatatcctactgttggatcttggg
catttcaaggtgtccagtcaaagcaggaagcttctgcctcagctctcattgtcctacagc
aacattgaagacatcatgtccagagcatatgacagctttgacatacagcttactagcctg
cagtttctttacagccaaccagatggtgactggaaaatggcccgtaagcagaaacagtca
ccgctccacatcctggagccggtggatctaaaaatggatttcagcagggcgatggttgtc
aaagactcccgcatggcaaagtataagatgtctggagagcttcctctgctgtctcttcgc
atttctgatgataaacttcgaagtgttctggagcttgtagaaagtatcccactgcccgag
agcagaccttctgcgcgcagcactggtccatcctccactccaaagccaaagcagtcattc
acgccccagctcactcccagaagacctctgaacttagccgaccagcgctcctcgctcatt
ttcgagtcatgtgagaccatcagcatcacctccttagggtcagaggaagatttgttctat
gatgctcccagctctcccatcggtgatcgaccatttttcccagacaatcccatgccactg
cgctatgcagacttaaacaaaagaaaaagtctgatcaaggaagactctcagaagaacatg
accgacttcatcatgaagtttgaaatcagtgagttttccgttcagttgtgtcgcctatct
gggggtcaggaggtcaccgtgctccacttggatatagagggtcttggcactgagctgaaa
ctgcgcacctttgacatgacctcaaatacctaccttcgagaaatctgcctcaagtgtcct
gaatacatggactctgaagagaagcaggttcaactgataactactctagacaacacagag
gttgacttgctcaccctggagtatatcaaagctgataagaatggccctgagttcaggtct
caacacaacaatactgagcagctcatcaaggtcaccttttcatccctggatgttcatcta
catacggaggctctcctcaatgccatgaacttcctcaacaacctccttcctccatccact
aagaaggagggagggcaggaggagctccccactatccctgaggaggacgaggcagaggca
gagagggagggagagaagaaggaggaagctactgtaaccaggaaaagaagctcaaggagt
tcaaagtttgcagatgtggtgaatctgcatatcagagctgatctccgctgtctgaaggtt
ttcattcgaggacagaaagccaggatctctgagattagtattgaaggtctggtttctgag
gttctgatgaggaagaaggagatggaggttctggccaacctgaagaacattgtgatccta
gactgcgacaaagatgccttttacaagaaggctgtgtctatagcagataaggaagtgttt
gccttccgaatggtgaactatacagatgcaacagaaggagacgcctatctggacatgtct
aaagttgacacttctgttacactgactgtgggatgcatccaggtcatcttcctcaacaag
tttgtctcctctatattggcattcgtcaataacttccaggaggccaaagaggccctggct
gaggtgacagtccatgctgcagaaaaggcagcgtcaggtgtgaaggagctggcagagcga
agcagtcgcatcgctctggaagtccacttcaacgcgcctgtcatcttcctcccccagtcc
tcctcttcctccaatgtcattgtagctgacctcggtttgctgtctgtcaaaaaccgtttt
tcaaagcagccatttaaaagtgatgctaagatcccgcctgttgtggatataatgactgtg
agactgactgacctcaagatgtacaggaccacgtacataaatgaagggtttcagggagag
acccaacttctgaagccagtcagcttggacttgaaaatccagagaaatctttcatccaac
tggtaccacagcatacctgacatagagatcactgctcatctaaagcccatgagtctgatc
ctcagccaggatgacatgatagtggtcctgaggactctgagtgagaacctgtcagaaaag
tccgatgctgttccaccttcagcttctccacccaccactgacccctcctccgactctgtg
tccaacaaagagtcccagggctctggaaccactggaccagccagcagtaacacagtggtg
acagccgctatcgtggagacacagaaaaacagcaagctgaagaacacactcaaattagac
ttcaagttcgattccatgacactggtcgtgtacagccctaatgggaatgagatccagccg
ttggactcgcatgatgagcagttaaagctggcagaatttactctgggcaccatctcgacc
tctgttcacatgttctccgacagctccatgaaggcatcagtacgacttgctgcctgcctt
cttgatgacaagagacccagaatcaagatggtcaccccaaggatgatggcgatgcgtccg
ggtgcagaaaagaacatgatggtggaggtgaactatcgtcagggccgtgaaggcacaacg
ttggacacagtggtgcaggatgtgtacttgtgtgcaagcatggagttcctgctcactgtg
gcagatatctttctcaaagccacccagcagggttttgctcaagtgccacaacacaagagc
agtactggagcgggagagaaaaagaacattaactcctctgtcacatctaaagagtccgct
gcacctccagccgcagtgacaaagacagagatgaatgttgtggtgcgtaacccggagatt
gtgtttgttgctgacctgacgcgtgctgatgcaccggccctggtgatgaccacgcagtgt
gaactattgatgaaaagtggtgcagagggatcacagatgactgctgttatcaaggacctc
aaggtagtggcgtgtccctttttgagagagaagaggagaaacaatgtgaccacagtgctg
cagccgtgtcaagtgttctttcagagtactcagtccccaaccacccctcaggctatggag
gtctccatcaatgctcttaaactaaaggtatctccaatcatcatcaacacagtgatcacc
atccagtcggctctgactcccacagcggagacccctgaggagctggatagtcctgttccc
attgacctgtgggagaaaaggggctggaaggagctcaaattctggttcctagaggaggag
ggggacgatgacacaaggtcactggttcgactgataccgcagggagagtcattacaggtg
accatcaaatcaatctgtctgactctggaggctggcgtgggacatcgcactgtccccatg
cttctggccaagtcctccttccatggagacgtcacaaactggtccacgctcattaactta
cacagtgagctcaacctggaggttcactactacaatgaggtaatgggagtgtgggaaccg
ctgctggagcccttagaagatgacacaagagatggttttagaccatggagacttgaattg
aagatgaagaagaagccagtgaagtacacatttttgtcagatgaggtggattacaatatt
ccagactataagacagtcatcatcatcagcagtaaagaccagctcaacatcacgctctcc
aaatgtggactggccatgctgagtaacctgggcacggcatttgcggaggctgccaaacag
acagctgagtgcttccagaaggatgaagctccgtttgtggtgaaaaaccgccttggcctg
ccagtgtccgtccgctatagtgagatgttttgtcccattggccagccgagcactaactgc
actgtgaagctgcaggatggagaaaccctcgggatggactattcaaccagaacagactcc
gaccagttctcagccatgacatccctgagtggaaaggactactacatacagcctactcca
gagggccacacctcggccagtgtgatacccctgatcaaagtgggcagaggaatgtacagt
gtaatgcacaaagactcaggagtcactcgcttcctggtctgtcagatttactctgtggag
ggcagcaagtacatcaagatccgctctcctttccagatcatcaatcatttcacaatacca
ttcaaagtttttgaaggatcaacatgtctgggtacagctcttcctactgaagagttctgt
gtgcctctggaatcatataggtctgagctgagccttcagccggtaacaggggacgacact
gacgatcaggtggcacagtttgagtactcagagggtttcagctacgaagatgtcagcaac
cagcagcctgagacacgcctccagcagacctgccgtcgccgtggaaaccaggatgtgatg
atgatcaacattgtgccattaaaggatgctgtgacattcaaacacaccggaggtattggg
gagaacttcgatgtgccctttgtgctccacctgtggccttccatcctgctacgcaacctg
ctgccttaccccatcgcctacaaactaaaggacagtggagtcgctgcccctgaggccatt
ctgaacccaggccactcggcccagcttcacaccgcagtcatcaacaagtcaagactcggt
ctccgcctactgaactactttgccgaggactggtctgctgagtacagtctccaaagtgac
caggaagagatcaccttcatcgtgttccagtctctacaagagaatgacgaaagcgatggt
gaagggacagagaggaagacggctgagttagacatagcggtgcatgttaaatatgaccgg
ggccagacagtgattgctatccactcaccctattggatggtgaataagacaggcaggttg
ctgcagtacaaggctgatgatatccaccgtaaacaccccctggactatgacatgcccctg
ctcttctccttcaagcctcggtacttcctgaaaaacaataaggtccgccttatgatttca
gacagtgaactctctgatgatttctccctggatacagttggtagccatggagatgtgaaa
tgtaaaggcaggtacaaagattacctggttggtgtgaagattgatgcgagcagtttcagt
ctgacccgcatcgtgacctttgtgcccttttacatgctggtcaacagaaccaagcacagt
gtctttatatgtgagatggggcaggaaaactggacagaggcacaaccagaacagtcagga
attcctttctggcctgagaacgacgccaagtggctaaagatcaaagtagaaggttgttta
tcgcctcctcgaactattgacttcactcgaccagagaactgcctgttgctgcatctggac
aactctgtgggtgggatcattgtggatgtcaacctctcagagcactcggccacaatccga
ttctcagagtatcatgatggcgcggctcccttcctcatcatcaaccacaccaaagaccag
actcttcagattcatcagagcggccggacagaaaccacgtgggtggctaatgagctgctc
gacctctccttctcagtggaggaggacagctctcagaagatgacagagcaggatgagcta
gaggctgagaaggctgtgcactatacctgggctgaacccactgggtcccgagagctttgc
tggaagtgtggcacttacagtgggaagctgaagagtgaggaggacctgcgggaggacatg
aacaatgagggaaaactgtttgtgatctctttttatgaaggtctccagcgcgttgttctg
ttcacggaagagaaacgtatctacaagctgctctgtgagagcgagaaggcgcagctggct
gaacaggaaatcatcctgtcgctaaagaacatgggtgtgtccctggtcaacaacagcaac
agccaggaggtctcatttattgggatcacaagctctgatgtggtgtgggaattaaagcct
aagaaaaagaatcggtggaagactctgagtgctaaagaagctgagattttagagaacagc
ttcaaagagtacatggaatctgcacccgtagacaatgccatcgtcgacctggaaaacaac
ttccaggtgtcctttactcccaatggcatggatatgcggatgctgcagccgtgtgacgct
cctctcaggagacacttcctgcctggggtgaaggtggagtacagcgtctcaccacgacag
agagcctaccgtgtccaaatccaccgcatacagatccagaatcagctgccaggagccatc
ttcccctatgttttctacactgtaaaacttccaaagtctatcgccatggactcagaaccc
aaacctctgactgatatcagcattgttaccagagcagcagggcactctgatatctctcgc
atcaagtatttcaaggtgttgattcaagagatggatctgaagcttgatctgggcttcctg
tatgccatcctggacctgttaacccctgagaacgccagcatcatgagctcagaacaggag
gtggaactgtttgagaaggacatagagtatataaagacagaattaaactctgactctgcc
actgacacctctcccatcagcctctatgagtacttccacatttcccccatcaagctgcac
ctgagtttctctctgagcacaggaggagaagatggcctgaaggcgcagagagataaagaa
ctcatccctgtccagtccctcaacctgctgctgaagagtatcggagcaactctgactgat
gtgcaggatgttgtcttcaagctggccttctttgagctgactttccagttctgcaccact
cagcagctacagtgggaggtgatcagacattattcaaagcaggctattaaacagatgtat
gtgctggtgctgggcctggacgtgcttggaaatccctttgggctaatcagaggactgtca
gagggagtggaggccttcttctatgagccctatcagggagccatccaggggccagaggaa
tttgttgaaggaatggctcttggggtgaaggctctggttggaggagctgtagggggtata
gcaggtgcggcctccaggataacaggggccatggcaaagggtgtcgctgccataacgatg
gatgaggaataccagcagaagagacgagaagctatgaacaaacaacccagtggcctgaga
gaggggctgaccaggggtggaaaaggactggtgtctgggtttgtcagtgggatcacaggg
attgttaccaaacctattaaaggagcccagaaggagggtgcggcaggcttctttaagggt
tttgggaaaggtctggttggtgcagtagccagacctacagggggcattattgacatggcc
agcagtacattccaagggatcaagagggcggctgagacttcccaagatgtagaatctcta
cgtcctcctcgcttcatccacgaggatggagtcatacgaccatataaggagagggaaggc
gtcggcagtcagatgctccagaaaattgagaatggacgttttgccaagtacagatatttt
gctcatgccaaggtcaatgattccgactttctcatgataaccaagaggggcatatttttt
gtgaccaaaggcacatttggccagctgacctgtgaatggcagtatctgtttgaagagttc
accaaggagccgatgattgtagaggaccgtcgccttcgcattgaagccaaggagagagta
aagtcagtcttccatgccaaggagtttgggaagatcataaacttcaaaactcctgaaata
gccaagtgggttcttgccaaactggaggatgcaagagagagtttacctaaatactga
DBGET
integrated database retrieval system
