Xiphias gladius (swordfish): 120805326
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Entry
120805326 CDS
T07311
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120805326 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120805326 (usp39)
Spliceosome [BR:
xgl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
120805326 (usp39)
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GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
120805326
NCBI-ProteinID:
XP_040011410
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Position
LG19:15006803..15012463
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AA seq
500 aa
AA seq
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MVSLKREREAEVDDDDSEDGVVAKIGRGRVVEDRRSRHCPYLDTINRSVLDFDFEKLCSI
SLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSL
EDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNV
PPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLC
SKKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPHPDLPP
EEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGSTE
KEYKTYKENFLKRFQLTQLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEE
AQATEKSTTYDLVANIVHDGKPSEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSEA
YIQIWKRQESDDGTSNHTGV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctgaagcgagaaagagaggccgaggtggacgacgatgacagcgaagacggg
gtggtagccaaaataggacgaggacgtgttgtagaagatcggagaagccgtcactgccct
taccttgacaccataaacaggagtgtactggactttgactttgagaagctctgctccatc
tctctctcccacatcaatgtctacgcctgccttatatgtgggaaatactttcaaggtaga
ggtctaaagtcccatgcatacactcacagtgtacagtttacccatcatgtgtttctcaat
ctgcacacactcaagttttactgtctgccagacaactatgagatcattgactcttcgcta
gaagacataacttatgtgctaaagccaactttcaccaagcagcacattgcagggctggac
aagcaaggtaaactgtaccgagcctacgatggtactacatacctgccaggcattgtgggg
ctcaacaacattaaagccaatgactatgccaatgtggtgttacaggctttttctaatgtt
ccacctttgcgaaactacttcctggaggaggaaaactacagaggaatccgcaggccaccg
ggggacatcatgttcctcttggtgcagaggtttggtgagctgatgcgcaaactttggaat
ccaagaaactttaaggcccacgtgtctccccatgagatgctgcaggctgtggtgctgtgc
agcaagaaaaacttccaaattaccaagcaaggagatgctgtggacttcatgacgtggttc
ttgaacgctctgcatggtgctcttggtggcacaaagaaaaagccatcaatcattactaaa
gcatttcaaggctccatgcggatcttctccaagaaacttccacacccagatttaccacca
gaggagaaagaggcattgcttgttacagaggagtaccaggaacagatgtctgagtccacc
ttcctgtttctgacacttgacctcccaacagcgccactatacaaggatgagaaggagcag
ctcataattccgcaggtccctctcttcaacatcctggccaagttcaacggcagcacagag
aaggaatacaaaacctacaaagagaattttctcaaaaggttccagttgacccaactgcct
ccgtacctcattttttgcatcaagagattcaccaagaacaacttctttgtggaaaagaac
ccaacaattgtcaacttccctatcacgaatgtagaccttcgtgagtacttgacagaagaa
gcccaagctacagagaagagcacaacttatgacctcgtcgccaacatagtgcatgatggg
aaaccctctgagggagcatacagaatacatgttctgcatcatggaactgggaagtggtat
gagatgcaggacctgcaggtgaccgacattcttccccagatgatcacactgtcagaggcc
tacatccagatatggaagagacaagagagtgacgatggcacaagcaaccacacaggggtg
taa
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