Xiphias gladius (swordfish): 120805743
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Entry
120805743 CDS
T07311
Symbol
prdm12b
Name
(RefSeq) PR domain zinc finger protein 12b
KO
K24255
PR domain zinc finger protein 12 [EC:2.1.1.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120805743 (prdm12b)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120805743 (prdm12b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-met
zf-C2H2_2
zf-C2H2_15
zf-C2H2_7th_ZNF462
zf-C2H2_6
CBM_3
zf-Di19
SR-25
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
120805743
NCBI-ProteinID:
XP_040012212
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Position
LG19:391430..403247
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AA seq
404 aa
AA seq
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MGSVLPGSSLALKPGFKPQQPLSLADIITSDILHSFLYGRWRHVLGEQQHHPHPHQHHLQ
PEDRTAPSASPKTAFTAEVLAQSFSGEVQKLSSLVLPSEVIIAQSSVPGEGLGIFSKTWI
KAGTEMGPFTGRLISPEHIDLYKNNNLMWEVFNEDGTVRYFIDASQEDQRSWMTYIKCAR
NEQEQNLEVVQIGSSIFYKAVETIPPDQELLVWYGNSHNTFLGIPGIPGGDDEQSKKSKN
DEFHTCEGSSSSSSSSSSSSSSSSSLGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCR
FCNRRFSQSSTLRNHVRLHTGERPYKCHVCQSAYSQLAGLRAHQKSARHRPSGDPGAQGG
GVVVVGGGGTGGVRSAHSPNPHPPQLTAVPHPASLVHHIPTMVL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgtgctgcccggctcctcgctggccctgaagccgggcttcaagccgcagcag
ccgctctccctggccgacatcatcacctcggacatcctgcacagcttcctgtacggccgc
tggaggcacgtgctgggcgagcagcagcaccacccgcacccgcaccagcatcacctgcag
cccgaggaccgcaccgccccgagcgcgagccccaagaccgcgttcaccgccgaggtgctc
gcgcagtccttctccggagaggtgcagaagttgtccagtctggtgttacccagtgaggtg
atcatcgcccagagctcggtcccaggagaaggtctgggcattttctctaagacctggatc
aaagcaggaacggagatgggaccgttcactggacgcctcatctcacctgagcacatcgac
ctgtacaagaacaacaacctcatgtgggaggtgtttaacgaggatgggacagtgaggtat
ttcatcgatgcgagtcaggaggaccagaggagctggatgacatatattaaatgtgcgagg
aacgagcaggagcagaacctggaggtggttcagattggcagcagcatcttctacaaggct
gtggagacgatccctccggaccaggagctgctggtctggtacggaaactcccacaacacc
ttcctgggaatccctggaattcccggaggagatgatgaacagagcaagaagagcaagaac
gatgagttccacacctgcgaaggctcgtcttcctcctcctcctcctcctcctcttcctcc
tcctcctcctccagcctgggacgcatgcgctgcgtcatctgccatcgcggcttcaactcc
cgcagcaacctgcgctcccacatgcgcatccacaccctggacaagcccttcgtctgccgc
ttctgcaaccgccgcttcagccagtcgtccacgctgaggaaccacgtgcggctgcacacc
ggcgagcgcccgtacaagtgccacgtctgccagtcggcgtactcgcagctggctggcctg
cgggcgcaccagaagagcgccaggcaccggcccagcggagaccccggggcgcagggggga
ggcgtggtggtggtgggcggaggagggacaggaggagtgcgttcagctcactcgcctaat
cctcacccaccgcagctgaccgccgtgcctcacccggcgtcactggttcaccatataccg
accatggtgctgtga
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