Xiphias gladius (swordfish): 120805827
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Entry
120805827 CDS
T07311
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120805827 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120805827 (ppil2)
03110 Chaperones and folding catalysts [BR:
xgl03110
]
120805827 (ppil2)
04121 Ubiquitin system [BR:
xgl04121
]
120805827 (ppil2)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120805827 (ppil2)
Spliceosome [BR:
xgl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
120805827 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
120805827 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
120805827 (ppil2)
Chaperones and folding catalysts [BR:
xgl03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120805827 (ppil2)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
U-box type E3
120805827 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
FOXO_KIX_bdg
Motif
Other DBs
NCBI-GeneID:
120805827
NCBI-ProteinID:
XP_040012367
LinkDB
All DBs
Position
LG19:3720275..3753069
Genome browser
AA seq
526 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTHFYGGKRAEIPQANFRRLSFDHCSLSLQPFEYPVCTEEGVV
FDLLSIVPWIKKYGTNPISGEKLEAKSLIKLNFAKNNDEKYHCPVLYNVFTNNSHIVANK
VTGNVYSYEAVEQLNIKTKSFKDLLTDEPFTRKDIITLQDPTNLDKFNVSDFFHVKNNLK
VLDPDEEKAKQDPAYHLNSTNLETRETLAELYKDYKGDQLLASTMKEPEAKKTDKLNAAH
YSTGRVSASFTSTAMTPSTTHEADAIADDTVRYQYVKKKGYVRLHTNKGDLNLELHCDKV
PKAGENFIRLCKKGYYAETIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCTYLDRKHTVFGRVVGGFETLTAMENVESDPKTD
KPKSEIKLISTTVFVDPYEEADAQIAAEREKELQKQEEERQQASITLKKAKEEQAPKTFK
EGVGKYINPATIKRPAAEDESGPSTSGAAAAKKSKGKTSFGDFSSW
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccaaaaagacaaaatgtacatcacatgtacggagtacacacac
ttttatggagggaaacgagcagaaatcccgcaggcaaacttcagacggctttcatttgac
cactgcagcttgtccctgcagccatttgagtaccctgtctgcacagaggagggagttgtc
tttgaccttctgagcattgttccatggattaagaagtatggtactaatccaatctccgga
gagaaactggaagctaagtctctcatcaaactcaactttgccaagaacaatgatgaaaag
tatcactgccccgttctatacaacgtcttcacaaataattctcacatcgttgccaacaag
gtcaccggcaatgtgtattcttacgaggctgtcgagcaactcaacattaagaccaagagc
tttaaagatctgctgaccgacgaaccctttaccagaaaggacattataacacttcaagac
cccacaaacctggataaattcaatgtttccgacttcttccacgtaaaaaacaacctgaag
gtgttggatccagatgaggaaaaggccaagcaagacccagcgtaccacctgaacagcacc
aatctcgagaccagggagaccttagcagagctgtacaaagactacaagggagatcagctc
ctggcttccaccatgaaggagccagaggccaagaagacagacaagttaaacgctgctcac
tactccacaggcagagtttccgcctccttcacgtccacggccatgactccttcaacaaca
catgaagcagacgccatcgcagacgacaccgtgcgttaccagtatgtgaagaaaaaaggc
tacgtccgtctacatacaaacaagggagaccttaatcttgagttacactgtgataaggtt
cccaaagctggagagaatttcatccgtctgtgtaaaaaaggatactatgctgagacgatc
ttccacaggtccatccggaatttcatgattcaaggaggggaccccactggcactggcaca
ggaggggaatccttctggggaaaacctttcaaggatgagtttcggcccaacctgtcccac
actggccggggggttctcagcatggcaaactctggtccaaacaccaacaagtcccagttc
ttcatcacgttccggtcatgcacctacctcgacaggaagcacacagtatttggaagggtt
gttggtggatttgagacactcacagccatggagaatgtggagagtgatcccaaaacagac
aaaccaaagtcggagatcaagctcataagtacgactgtgttcgtggacccgtacgaagaa
gctgatgctcagatcgcagcggagcgagagaaggagctgcagaagcaggaggaggagagg
cagcaggccagcatcaccctgaagaaagccaaggaggagcaggcgccaaagaccttcaaa
gagggtgtgggcaaatacatcaaccctgccacaataaaacgtccggctgctgaagatgag
agcggaccgtccaccagcggagcagcggcggccaagaagtccaaaggcaagaccagcttc
ggagacttcagctcctggtag
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