Xiphias gladius (swordfish): 120805845
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Entry
120805845 CDS
T07311
Symbol
smyd1b
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1b isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00310
Lysine degradation
xgl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120805845 (smyd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120805845 (smyd1b)
Enzymes [BR:
xgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
120805845 (smyd1b)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
120805845 (smyd1b)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120805845 (smyd1b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
120805845
NCBI-ProteinID:
XP_040012402
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Position
LG19:complement(10619892..10628913)
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AA seq
489 aa
AA seq
DB search
MANVAIFDSPGKGRGLKATKEFWAGDVIFSEPSLAAVVFDSLVERICHSCFRRQDKLQRC
GQCKFAHYCDRTCQRAGWAEHKQECGAIKAYGKVPNENIRLAARVMWRLDKEGSVVSDMQ
LTTLEELEDHIADMQEDELKEFKVDIHNFLDYWPRNSKQHTIDVISHIFGVINCNGFTVS
DQRGLQAVGVGLFPNLCLVNHDCWPNCTVILNHGNQSAVNTMFHSHQRIELRSLGKIAEG
EELTVAYVDYLNLSEERQRLLKTQYFFECTCEHCKNRINDDLKLGGKEVDGVKPSEEQVK
ETTDYCFEMLEKMDKARLSGDYHEVVKICRECIEKTEPVLADTHIYLLRIWSTLSEVQAY
LQYFDDAAAYARKMVEGYMKLYHPNNAALGMAAMRAGVTHWQAGQIDIAHGMICKAYAIL
MVTHGPTHPITKDLEAMRMQTEMELRMFKQNEYVYHSMREAALKNKPMTMMHEPKSVEEG
IKNLFHRRK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtggcaatatttgactcacctggaaaggggaggggtctgaaggcgaccaag
gagttttgggctggagatgtgattttttctgagcccagtcttgcagctgttgtgtttgac
agtctagtggagcgtatttgccacagctgtttccgcagacaagacaagctccagaggtgc
ggccagtgcaaatttgcccattattgtgaccgaacctgccagcgtgccggctgggccgaa
cacaagcaagaatgtggtgccatcaaagcttatggcaaagtaccaaatgagaacatccgt
ttggctgcccgtgtcatgtggcgacttgacaaggaggggagcgtggtgtccgacatgcag
ctgaccacactggaggaactggaggaccacattgcggacatgcaagaggatgagctgaag
gagttcaaagtggacatccacaacttcctggactactggccccgaaacagcaagcagcac
acaatcgacgtcatctcgcatatttttggagtgatcaactgcaacggcttcactgtgagc
gaccagaggggtcttcaggcagttggtgtcggtcttttcccaaatttgtgtcttgtgaat
catgactgctggccaaactgcaccgtaatcctcaaccacggcaatcaatcggctgtgaat
actatgtttcattctcatcagaggattgagctgcgttctttgggtaagattgcagagggg
gaagagctgacagtggcgtatgtggactacttgaatttgtcagaggagagacaaaggctg
ctgaaaacacaatatttctttgaatgcacatgtgagcactgcaagaaccgcatcaacgat
gacttgaagttggggggaaaggaagtggacggagtcaagccctcagaggaacaagtgaaa
gagacaacagattattgctttgaaatgctggagaagatggacaaggctcgattaagtggt
gactaccatgaggtggtaaaaatctgcagggagtgcatagagaaaaccgagccggttttg
gctgacacacacatctacctgctgaggatttggagcactttaagtgaggtgcaggcttac
ctgcagtactttgatgatgcagcagcgtacgcccgtaagatggtggaaggatacatgaag
ttgtaccacccaaacaacgctgctctcggtatggctgccatgcgagcaggagtgacccac
tggcaggctgggcagatagacattgcacacgggatgatctgcaaggcctacgccattctc
atggtcactcacggcccaacacatcccatcaccaaagacctggaggcaatgcggatgcag
acggagatggaactgaggatgttcaagcagaacgagtacgtttaccatagtatgagagaa
gccgctctgaagaacaaaccaatgaccatgatgcatgaacccaagtccgtggaggaggga
atcaagaatctcttccaccgaaggaagtaa
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