Xiphias gladius (swordfish): 120806086
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Entry
120806086 CDS
T07311
Symbol
rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120806086 (rnf170)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120806086 (rnf170)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120806086 (rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
Baculo_IE-1
zf-rbx1
zf-RING_10
DpnI_C
Motif
Other DBs
NCBI-GeneID:
120806086
NCBI-ProteinID:
XP_040012711
LinkDB
All DBs
Position
LG20:complement(10597955..10608111)
Genome browser
AA seq
268 aa
AA seq
DB search
MEDSQCGDLDYLIQDEDTLIEGVSNQVLFVVVLSITFLAGLLTLLCRQEQQNIHPENQEH
VRAVRQQLQTEQDENLQAEDRQQYYTDMSCPVCLQQAVLPVETNCGHLFCGSCIIAYWRY
GTWLGAINCPICRQMVTLLFPLFHEHAAPQRVQDGEAEPQLILRDINDYNRRFSGQPRSY
MDRLRDVPTLLRHAFREMFSVGGLFWMFRIRILLCLVGAITYLASPLDILPEALFGLLGF
MDDFFVILLLFVYISIMYREVVTQRLNG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagtcaatgtggggacttggactacctgatccaagatgaggacaccctcatt
gaaggcgtcagcaaccaggtcttatttgttgtggtgctcagcatcacctttcttgcaggc
ctcctcactctgctctgcagacaagagcagcagaacattcatcctgagaatcaggagcat
gttcgagctgtccgacagcaactccaaacagagcaggatgaaaatcttcaggcggaggac
aggcagcagtattacacagacatgtcttgtcctgtgtgtttacagcaggccgttctgcct
gtagaaaccaactgcggacaccttttctgtggctcctgcattatagcctactggagatat
ggcacctggctgggtgctattaactgccccatctgcagacaaatggtaacattgctcttc
ccactatttcatgagcacgctgctcctcagagggtccaggatggcgaagcagaacctcag
cttattttacgagacatcaacgattataaccgcaggttctcaggccagccgagatcttat
atggacaggctgcgagatgtgcccaccctgcttcgacatgcctttagggagatgttttct
gtgggtggcctcttctggatgttcaggattcgaattcttctctgcctagttggtgcaatc
acctacctggcctcgccactcgacatcctccctgaggcacttttcggtctcctgggattc
atggatgatttctttgtaatcctacttctctttgtgtacatctctatcatgtacagagag
gtggttacacagagactgaacggctag
DBGET
integrated database retrieval system
