Xiphias gladius (swordfish): 120806191
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Entry
120806191 CDS
T07311
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120806191 (vldlr)
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120806191 (vldlr)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Motif
Other DBs
NCBI-GeneID:
120806191
NCBI-ProteinID:
XP_040012989
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Position
LG20:complement(4479373..4539102)
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AA seq
867 aa
AA seq
DB search
MVTSTPGVLLLPMLICLQHCINVHGTKTECEASQFQCGNGRCIPSVWQCDGDEDCTDGSD
ENSCVKKTCAEVDFVCHNGQCVPKRWHCDGEPDCEDGSDESLEICHMRTCRVNEFSCGAG
STQCIPIFWKCDGEKDCDNGEDEVNCGNITCAPNEFTCASGRCISQNFVCNSEDDCGDGS
DEVECAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPSRCGRHPTPPAKCSSSE
MQCRSGECIHKKWRCDGDPDCKDGSDEANCPETSVRTCGPDQFKCDDGNCILGSRQCNGI
RDCADGSDEVSCKNMTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNEC
LLNNGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCE
CHNGYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALDADFDQ
QMIFWADLGQKAIYSTVLDKRRDDGAHNKVIDNVQTPVGIAVDWIYKNLYWSDLSTKTIS
VANFNGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVATD
IQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSDYLAHPFALTVFEDRVF
WTDGENEAIYGANKFTGSDVVTLASNLNDPQDIIVYHELIQLSGTNWCTEKGENGGCSYM
CLPAPQINKHSPKYTCVCPEGQELAADGLRCRPDPSTKGPSKDDGKALIQPPPEANVSTS
IQVNSTARGSAAAWAILPVLLLAMAVAGGYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLN
IDITRHSANVGHTYPAISIVSTDDDLS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccacaccgggggtccttctgctgccgatgctaatatgtctccagcactgc
attaacgtccatggtactaagacagaatgtgaggctagccagtttcagtgtggaaatggt
cgctgcatcccgtccgtctggcagtgtgacggagacgaggactgcaccgacggcagcgac
gagaactcctgtgttaaaaagacttgtgcagaggtggactttgtgtgtcacaacggccag
tgtgtcccgaagaggtggcactgtgatggggagccagactgtgaggacggatcagacgag
agcttagaaatctgccacatgaggacgtgtcgtgtgaacgagtttagctgcggcgcgggc
tccacccagtgtatccccatcttctggaaatgtgacggagaaaaggactgtgacaatgga
gaggacgaggtcaactgtggtaacatcacctgtgctccaaatgagttcacgtgtgccagc
ggccgctgcatctctcagaactttgtgtgtaacagtgaggatgactgtggtgatggctca
gatgaggtggagtgtgctccgtcctcttgtggtcccagtgaattccagtgcggaaactct
tcgtgcatcccggccagctgggtgtgtgacgacgacgttgactgccaggaccagtcagat
gagtctccatctcgttgtggccgtcacccgacgccgccagccaaatgctcgtctagtgag
atgcagtgccgctcaggagagtgtattcacaagaaatggagatgtgatggagaccccgac
tgcaaggatggcagcgatgaagccaactgtcctgaaacatctgtacgcacctgtggacca
gatcagttcaaatgtgatgatggaaattgcatcctgggcagcagacagtgtaacggcatc
agagactgcgccgacggatcagatgaagtcagctgcaaaaacatgactcagtgtaatggg
ccagagaagttcaaatgtcgcagcggggagtgtatagagatgagcaaagtgtgtaacaag
gcccgggactgtcccgactggagtgatgaacccatcaaggaatgcaatctaaacgagtgt
cttctgaataacggcggctgctctcacatctgcaaagacatggtgattggctttgaatgt
gactgcacacctggactgcagctcattgaccacaagacctgtggagacatcaatgagtgt
ttgaaccctggcatctgcagtcagatctgcatcaacctgaagggaggatacaagtgtgaa
tgtcacaacggctaccagatggatccgaccaccggagtctgcaaggctgtcggtaaggag
ccctgcctgatctttactaaccgtcgtgacatccgtcgtctgggtctggagagaaaggag
tacactcagattgtggagcagcagaggaacacagtggctctggatgcagactttgaccag
cagatgatcttctgggctgacctgggccagaaggccatatatagcactgtgctggacaaa
cgaagagatgatggtgcccacaacaaagttatagacaacgtccagactccagtgggaatc
gctgtggactggatctataagaacctgtactggtctgatctcagcaccaaaaccatttct
gtagccaatttcaacggaacaaaacagaaagttctgttcaacagaggccttaaagaacca
gcttccatcgctgtggatccactgtctgggtttctgtactggtctgactggggtgaacct
gccaagattgagaaatctggtatgaacggagtcgacagacaggttctggtggcaacagac
atccagtggcctaatggcatcactctggacctaatcaaaggcaggttgtattgggtcgac
tctaaactgcacatgctttgtagcgtcgacctgaacggagacaacaggaagaaagtactg
cagtcctcagactacctggctcatcccttcgctctcactgtttttgaggatcgagtcttc
tggacagatggcgaaaatgaagctatctacggtgcaaacaagttcaccggctctgacgtg
gtcacgctggcgagcaacctgaatgacccccaggacatcatagtctatcacgagctaatc
cagctatcgggtactaactggtgcacagaaaaaggtgaaaatggaggctgtagctacatg
tgtctgcctgcaccacagatcaacaaacactctcccaaatacacttgtgtgtgtccagag
ggacaggagttggctgctgacggcttacgctgcagacctgacccttctaccaaaggtccc
tcaaaggatgatgggaaagctctaatacagccacccccagaagccaacgtgagcacgtcg
atccaggtgaactccaccgccagagggtctgctgctgcgtgggccatactgcctgttttg
ctgctggcgatggcggtggcaggcggctacctgatgtggagaaactggcaactgaagaac
cagaagagcatgaactttgacaaccccgtgtaccttaagaccacagaagaagacctcaac
attgatatcacccggcatagcgctaatgtgggacacacctaccctgcgatttcgatagtg
agcacagatgatgatttgtcctga
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