Xiphias gladius (swordfish): 120806227
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Entry
120806227 CDS
T07311
Symbol
apc
Name
(RefSeq) adenomatous polyposis coli protein
KO
K02085
adenomatosis polyposis coli protein
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04310
Wnt signaling pathway
xgl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120806227 (apc)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120806227 (apc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xgl01009
]
120806227 (apc)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120806227 (apc)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120806227 (apc)
Protein phosphatases and associated proteins [BR:
xgl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120806227 (apc)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
120806227 (apc)
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
120806227 (apc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APC_r
Arm_APC_u3
APC_rep
Arm
APC_N_CC
SAMP
Suppressor_APC
APC_15aa
APC_u14
ARM_ARMC5
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
120806227
NCBI-ProteinID:
XP_040013084
LinkDB
All DBs
Position
LG20:25535807..25563223
Genome browser
AA seq
2289 aa
AA seq
DB search
MAAASYDQLLRQVEVLKMENSNLRQELQDNSNHLTKLETEASNMKEVLKQLQGTIEEESG
EASGSQLELIERLKEMSLDSAGFKPRSRPPLPPSSSSSSASSGSGAPGGAAGGSGAPGPQ
TTTAFPRRGLPSAGRDSHDRCLEELEKERSLLLAELEKEEKEKDWYYAQLQNLTKRIDSL
PLTENFTLQTDMSRRQLEFEARQIRSAMEEQLGSCQEMERRAQARVSRIQQIEKDILRLG
ARLQVEGAQGASDSSGLAGPQSSTSRIDHEPSNETSYSVPRRITSHLGTKVEMVYSLLSM
LGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGNDKDSLLLGNSRGSKEARA
RASAALHNIVHSQPDDKRGRREIRVLHLLEQVRHYCEACWTWQENHERGVDQEDNPMPSP
VEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAVAELLQVDCEMFGLSSDHYSVTLRRYA
GMALTNLTFGDVANKATLCSMKGCMRAMVAQLKSESEDLQQVIASVLRNLSWRADVNSKK
TLREVGSVRALMGCALEVQKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLT
HCSHTNTLAIIESGGGILRNVSSLIATNEAHRQILREHGCLPTLLQHLKSHSLTIVSNAC
GTLWNLSARDAKDQEALWELGAVGMLRNLIHSRHKMIAMGSAAALRNLMANRPARYKDAS
VVSPGAGAPSLHARKQKALFEELDAQQLSETFDNIDNLSPKAAHRKGRGCNGTGGGGSTT
RSYANTPVLSSPKNGDGSKRTGEEAAYPRPVFPPSVRASSDSLNSVTSADGYGNRGKTKP
SSEPFYSSDESGANKCCVYRKYPADLAHKIRSANHMADDDGAELDTPINYSLKYSDEQLN
SGRQSPSHRGGIESDDDDGQDARLRRRNDGSESAASSSRMASVPPPRYVVVTATSNYSGD
STGEQPIDYSLKYGADAARKPLFKSEETAAPSLTPPPSTSASNLRPPPPPANRAVPKSNQ
ESTQTYCVEDTPICFSRGSSLSSLSSEEEEEEDGDVIGRKRRGGSVVSGGGSSNDYPTLP
VSEKDAHEQQQQRQQKEAESQTAATPSTRGRRGHHHHHGHAHHHHHHHHVTSSSGARTPK
SPPEQPYAQETPLMFSRCTSVSSLDSFSTSSIASSVRSSEPCSGVPSGVVSPSDLPDSPG
QTMPPSRAKTPPLQPPTQKTEEETAKKKDEEESSADVLLHFATESTPHGFSRASSLSALS
LDEPYIAAEMKKKTEEEEGGNEERKEDEAAKPILDESDDDDDIEILEACINMAMPKSSRK
PKKQQQAAPRKPSQLPVYKLLPPQSRTQSQQRKDMPPPPPEEVPRVYCVEGTPLNFSTAT
SLSDLTIDSPPNEETSAAVIPVAPPTSTQRRRAGLPEGENGDDILAECISAAMPKAKPRK
PIRVAANSEHLPAPPLAPPLPPPAPPPLGSQQQQKKKPTSPVKPMPQRAAYGVVTATATK
AKPGFAFDSPRHYTPIEGTPCCFSRNDSLSSLDFDEDDGGGEKDEEEKKTKEEEGRKRKQ
QTAAVFPRTKPTTNQTATDEKQKFAIEDTPVCFSRNSSLSSLSDIDQENNNKEFAPPPEQ
QDGGKAGTKSPPPAQVDSKPRPPAASGYAPKAFHVEDTPVCFSRNSSLSSLSIDSEDDLL
QECISSAMPKKKKKASAAAAPAAAATPLPVPKADDSILAEEDPSDAPRSPASPDSESFDW
KAIQEGANSIVSSLNAAAAASSLSRQPSSDSDSVLSLKSVGSPFRLPTANNNAEEEEAEE
KEEVKRGARILKPGERSTLEAKKKKEEEEEEEEEVKAVRGGKKVYRSLITGKPRAEPAAR
GRSKPRAAAVAKAPGSSDDRGGGSSRDSTPSRSSTAASQKGGKLSQLPRTASPGSASSSS
ASRPAKQSMAARTSGGIPRSESASRVGGSTAAKKQKAEPEKPTLVRQSTFIKEAPSPTLK
RKLEESAAAAAAAAALESPSSPDTSLPPTSRRHDINRSHSESPSRPQEVTSTRFSRTGTW
KRENSGGGGGGSGGKHSTSLPRVGTWKRTGSSSSVLSASSESSEKGRSEEEGAARSKGTW
RKAKSGGGSSAGRSFTDKSEDVWVRLEDCPVNNPRSSSSCSARSPTAANAPPIIDSPAPS
KIPSSSSSSSSNLNLRRSCESLDEKPPPPPPERQQPQQPQQRGQQRSGAVAARVSPFNYT
PSPRKSNADVTTTATPTNTTSSSTPTRPSLIPTPVTKKREPKGGEGGSSSSGGGGGSGGE
RGSYIVTSV
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgtcgtatgaccagctgctgaggcaggtggaggtgttaaagatggagaac
tccaacctgagacaggagctgcaggacaactccaaccatctgaccaaactggagactgag
gcctccaacatgaaggaagtgctgaaacagctgcagggcaccatagaagaagagtctgga
gaggcgtctggatctcagctggagctcatcgaaagactgaaagagatgagcctggactct
gcaggttttaagcccaggtcaaggcctcctctgcccccctcgtcctcctccagctctgcc
tcttctggttctggagctcctggaggagcagctggaggctctggagctccaggcccccaa
acgaccacagccttccctaggagagggctgccgtctgctggcagagacagccacgaccgc
tgcctggaggagctggaaaaggagaggtctctcctattggctgagctggagaaggaggag
aaggagaaggactggtactacgctcagctccagaatctcaccaagaggatcgacagtctg
cctctcactgaaaactttacactacagacggacatgagtcgtcgtcagctggagtttgag
gctcgtcagatccgatcagcgatggaggagcagctgggctcctgtcaggaaatggagagg
agagctcaggctcgtgtgtctcgaattcagcagatagagaaagacatcctgagactggga
gctcgactgcaggtggagggagctcagggggcgagcgacagcagcggattggctggacct
cagagctccactagccgaatagaccatgagccgtccaatgaaacaagctactctgtgcct
cgacgaatcaccagtcacctgggaaccaaggtagagatggtgtacagtcttctgtccatg
ttggggactcatgataaagatgacatgtcacgtacacttcttgccatgtcaagctcgcag
gactcgtgcatcgccatgcgtcaatccggctgtctgccgctgctcatccagctgttgcac
ggcaacgacaaggactcccttttgttaggcaattcccgtggtagtaaggaggctcgtgcg
cgggcgtcggcagcgctgcacaacatcgtccatagtcagccggacgataaacgaggaagg
cgcgagatcagagttctccacctgttggagcaggtgcgtcattactgcgaggcatgctgg
acctggcaggaaaaccacgaaaggggcgttgaccaggaggacaatcccatgccatctccg
gtggagcatcagatctgtccagccgtgtgcgtccttatgaaactttccttcgatgaagaa
catcgacacgccatgaatgaactcggcggtctgcaggcagtggcagagctgctgcaggtg
gactgtgaaatgttcggtctgagcagcgatcattacagcgtcactctgcggcggtacgcc
ggcatggcgctcaccaacctcaccttcggagatgtggccaataaggccacgctgtgctct
atgaagggctgcatgagagcgatggtcgcccagctgaagtctgagagtgaagacctgcag
caggtgatagcgagtgttttgagaaacttgtcgtggcgtgctgatgtcaacagtaagaag
acgctgcgtgaggtcggcagtgtgcgagcgctgatgggctgcgcccttgaagtccagaag
gagtcgactctgaagtccgtactcagtgcactctggaacctgtctgctcactgtacggag
aacaaggcagatatctgtgcggtggacggagctctggcgtttctggttggaactctcact
cattgcagccacaccaacacgcttgctatcattgagagtggcggcggaatcctgcgcaat
gtgtccagcctcatcgccaccaacgaggcgcacaggcagatcctgcgtgagcacggttgc
ctgccgactctgctgcagcatctaaagtctcacagtctcaccattgtgtccaacgcctgt
gggacgctctggaacctgtcagctcgagacgccaaagaccaggaggcattatgggagcta
ggtgctgtgggcatgctgcgtaacctcattcattcccgccacaagatgattgccatgggc
agcgccgccgccctgcgcaacctgatggccaaccgcccggcgcgctacaaggacgccagt
gtggtgtcacctggcgccggcgccccgtcgctgcacgcccgcaaacagaaggcattattt
gaggagctggatgcacagcagctgtcagagacttttgacaacattgacaacctgagcccc
aaggcggcacacaggaaggggaggggctgtaacggtaccggaggaggagggagcacgacg
cgctcatacgccaacacgccagtgctgtcaagcccaaagaacggagatggatcaaagagg
acgggggaggaggcagcgtaccctcgcccagtgttcccgcccagcgtccgagcgtccagc
gacagcctcaacagtgtgacgagcgctgacggctacggcaaccgtggcaagaccaaaccg
tcatcagagccgttctactcatcggatgagagcggagccaacaagtgctgcgtctacagg
aagtacccagccgacctggctcacaagattcgcagtgccaaccacatggcggacgacgac
ggagcagagctggacacacccatcaactacagcctaaagtactctgacgaacagctgaat
tctgggagacagagtccaagtcaccgtggtggcatcgagagtgatgacgacgatggacag
gacgctaggctgaggaggaggaacgatggcagtgaatcagccgccagcagcagccgcatg
gcatctgtcccgccgccacgctacgtcgtcgtcacggcaacatcaaactacagcggtgac
tcaacaggcgagcagccaatcgactacagcctgaagtacggtgctgacgctgcccgcaaa
ccactgttcaagtcagaagagactgctgccccctcccttacccctcctccatccacctcc
gctagtaatctccgcccccctcctcctccagccaatagggcggtgccaaaaagcaaccag
gagtcaacgcagacatactgtgtggaagacacacccatctgtttctccagaggcagctcg
ctgtcatcactgtcatcagaggaggaggaagaggaggacggtgatgtcattgggagaaag
aggaggggcgggagtgtcgtcagtggcggcggcagcagcaacgactacccgacacttcct
gtcagtgagaaagatgcgcatgagcagcagcagcagcggcagcagaaggaggcggagagc
cagaccgctgccactccttccacacgggggcgacgaggtcaccatcaccaccatggccac
gcccaccaccaccatcaccaccaccatgtaacatcttcatctggcgccaggactcctaaa
agcccaccggagcagccgtacgctcaggagacgccgctgatgttcagccgctgcacgtcc
gtaagctccctggacagcttctccacctcctccatcgccagctctgtgcgctccagcgag
ccttgcagcggcgtgccaagcggtgtggtcagccctagcgacctgcccgacagcccgggg
caaaccatgccaccgagccgtgccaagacgccaccactgcaaccgccgacgcagaagacc
gaggaggaaacggccaagaagaaggatgaggaggagagcagcgctgacgtcctcctgcac
ttcgccaccgagagcacgccgcacggcttctcccgggcctccagcctgagtgcactaagt
ctggacgagccgtacatcgcagcagagatgaagaagaagacagaggaggaagagggaggg
aatgaggaaaggaaggaggatgaggcggccaaaccgatcctcgacgagtcagacgacgac
gacgacatcgagatcctggaggcttgcatcaacatggccatgcccaagtcgtcacggaaa
ccaaagaaacagcagcaagcagcaccacgtaaacccagccagcttcctgtctacaagctc
ctcccacctcaaagccgcacccagtcacaacagaggaaggacatgccgccgccgccgcca
gaggaagtgccaagagtttactgtgtggagggaacgccactcaacttctccactgccacc
tcgctcagtgacctcaccatcgactctccgcccaatgaggagacatcagcagctgtcata
cctgtagcgccgccgacctctacccaaaggaggcgagcaggacttcctgagggcgagaac
ggtgacgacatccttgccgagtgcatcagcgccgcaatgcccaaagccaaacccagaaaa
ccaatcagagtggcagcgaacagtgagcacctcccagccccgccccttgcccctcctctt
cctcctccggccccacctcctcttggctctcagcagcagcagaagaaaaagccgacgtcg
ccagtgaagccaatgccccagcgggcagcgtatggcgtcgtcacagcaacagctaccaaa
gcaaaaccagggtttgccttcgactcgccgcgacactacacccccatcgagggaacgcca
tgctgcttctcacgcaatgactcgctgagctcactcgactttgacgaagacgatggcggc
ggcgagaaggatgaagaggaaaagaaaacaaaagaagaagaaggcaggaagaggaagcag
cagacggcggccgttttccctcggacgaaacccacgacaaatcagacggcaacggacgag
aagcagaagtttgccatcgaggacacgcccgtctgcttctccagaaactcgtcactgagc
tcgctgagtgacatcgaccaggagaacaacaacaaggagttcgccccgccgcctgagcag
caagatggaggcaaagcaggaacaaagtctcctcctcctgcgcaggtggattcaaagccc
cgtccccctgcagccagcggctatgcccccaaagccttccacgtggaggacacacccgtt
tgcttctccaggaactcgtcgctcagttcgctcagcatcgactctgaggacgacctgctg
caggagtgtattagctccgccatgcccaagaagaaaaagaaagcttctgcagctgccgcc
cctgccgccgctgccacgccgcttcctgttcccaaagccgatgacagcattctggccgag
gaggatccttcagatgcaccaagaagccctgcctcccctgactcagaatcatttgattgg
aaggcaatccaagaaggtgccaactcgattgtcagcagccttaacgccgccgccgctgcc
tcgtccttgtcccgccaaccgtcatcagattcagactccgtcctctctctaaagtctgtt
ggctcaccattccgcctgccgacagccaataacaatgcagaagaagaagaggcggaggag
aaggaggaggtgaagcggggagcgaggatcctgaagccgggagagcgcagtacactggag
gccaagaagaaaaaggaggaggaagaggaagaggaggaggaagtgaaggcggtgagaggc
ggtaagaaggtgtataggagtctgatcacaggtaagccgagggcagagccagcagccagg
gggcggagcaaacccagagcagcagctgtggccaaagctccaggcagcagcgacgacaga
ggaggcgggtcatctcgggactccacgccatctcgctcctccacagcagccagtcagaaa
ggagggaagctttcacagctgccgcgcaccgcgtctccaggaagtgcatcatcatcatca
gcctccagaccagccaaacagagcatggcggcgaggaccagtggtggcatcccgaggagt
gagtcagcatcgagggttggcggctccacagcagcaaagaagcagaaggcggagcctgag
aagccgacgctcgtccgacagtcaactttcatcaaagaagctcccagtccaacgctgaag
aggaagctggaggagtccgccgcagcagctgcagcagcggcggcgttagagtcaccgtcc
agtcctgatacatcactgccaccaacatccaggagacatgacatcaaccgctcacactct
gagagcccctcacgcccacaggaagtgacatcaacgcggttcagccgcactggcacctgg
aagcgggaaaacagtggaggcggaggcggagggagcggtgggaaacactcaacatcgtta
ccacgcgtggggacgtggaaacggacaggaagctcatcgtcggtgctgtcagcatcgtcg
gagtccagcgagaagggccggagtgaggaggagggtgctgcgaggtcgaaggggacatgg
agaaaggcgaagagcggcggtggctcatcagctggccgcagcttcaccgacaaatcagag
gacgtgtgggttcgtctcgaggactgtcccgtcaacaacccacgctcatcctcttcctgt
tcagcccgctctcccactgccgccaatgccccacccatcatcgacagccccgccccctcc
aagatcccctcctcctcttcttcctcctcttccaacctcaacctgcgtcgcagctgcgaa
agcctagacgaaaagccgccgccgccgccacccgaacgccaacaaccccaacaaccgcag
cagcgtggtcagcagcgaagtggcgccgtggcagcgcgagtcagccctttcaactacacg
ccgagcccaaggaagagcaatgctgatgtcaccaccactgccacgccaaccaacacgaca
tcatcatcgacccccacacgaccttcactcatccccacccccgtcaccaaaaaacgggag
ccaaagggcggagaaggtggcagcagcagcagcggcggtggtggcggcagcggcggcgag
cgtggctcgtacatcgtgacgtcagtgtga
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integrated database retrieval system
