KEGG   Xiphias gladius (swordfish): 120806245
Entry
120806245         CDS       T07311                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03082  ATP-dependent chromatin remodeling
xgl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120806245
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120806245
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:xgl01009]
    120806245
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xgl03021]
    120806245
   03036 Chromosome and associated proteins [BR:xgl03036]
    120806245
Protein phosphatases and associated proteins [BR:xgl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120806245
Transcription machinery [BR:xgl03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     120806245
    SWI/SNF complex
     120806245
Chromosome and associated proteins [BR:xgl03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    120806245
   PBAF complex
    120806245
   SWI/SNF complex
    120806245
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd
Other DBs
NCBI-GeneID: 120806245
NCBI-ProteinID: XP_040013117
LinkDB
Position
LG20:1236567..1257617
AA seq 381 aa
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPPYLSKPTTWHISYPISQEQK
AKRSSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVE
ALVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQ
IESYPTDSILEEQADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLG
GEFVTTIAYSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGEADQWCPLLETLTDAEMEKK
IRDQDRNTRRMRRLANTAPSW
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcaactagcgctaagtaaaacgtttggtcagaagccagttaaatttcagttagaacaa
gatggggacttttacatggttgggtcggaggttggaaactatttacgtatgttcaggggc
tctctgtataaaagatatccatctttatggaggaggctagcctcagtggaggagaggaag
aaaatcgtagcatcatcacatgccactagtgttactctgctgaaggcatcagaatgtgaa
gagatcttcgagggtaatgatgagaaatacaaggcagtgtccatcagcacggagccccca
ccttacctcagcaagcccaccacctggcacatcagctatccaatatcccaggagcagaaa
gcaaagaggagcagtcagtgggtccccacactgcccaatagttctcaccatctagatgct
gtaccttgctccaccaccatcaaccgtaacagaatgggccgtgacaagaagaggaccttc
cctctgtgctttgatgaccatgaccctgcagtgatccatgagaatgcagcccaggtagag
gctctggttcccattcgtctagacatggagatagatggacagaaactgcgagatgccttc
acatggaacatgaatgagaaactgatgaccccagagatgtttgcagagattttgtgtgat
gacctggacctgaatcctctggcctttgtccctgcgattgcctcagccattcgtcagcag
attgagtcctaccccactgacagcatactagaagagcaggcagaccagagagtcatcatc
aagctgaacattcacgtggggaacatctctctagtggaccagtttgaatgggacatgtcg
gagagggagaactccccggagtcatttgcattgaagctgtgctctgagctgggtctgggt
ggagagtttgtaaccactatcgcctacagcattcgtggtcagctcagctggcaccagagg
acctacgccttcagtgagaacccactccccacagtagagattgccattcgcaatacaggg
gaggcagaccagtggtgccccctgctggagaccctcacagatgctgaaatggagaagaag
atccgagaccaagacaggaacacaaggcgtatgaggagactggccaacactgctccgtcc
tggtag

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