Xiphias gladius (swordfish): 120806247
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Entry
120806247 CDS
T07311
Symbol
ric1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1 isoform X1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120806247 (ric1)
Membrane trafficking [BR:
xgl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
120806247 (ric1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
120806247
NCBI-ProteinID:
XP_040013119
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Position
LG20
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AA seq
1442 aa
AA seq
DB search
MYFLTGWPRRLLCPLRSEEEPFHIQPSSQRFYFAVLSETQLSIWFSRPSVLIVSYIESAK
AAAQFGFYQKAEWKPDNSMIAVASAKGYILLFDVLGGGDDKYLYEPVYPKGSPRVKVTPG
YKEEQCAPALSLEMKKPVDLEAPITSLQSLQEDLLVCTADGYLHVLHWDGLGSNGRKAIC
LTTIPFSLDLQSARGGPSLDLEGVYIRCMEYCVTLDGFAVVLSDGRLGFITPLSNTITAD
QLQGVWAADVTDGTCVAVNNKYRLMAFGCASGSVLVYMIDTTTGSMQLSHKLELTPKHYP
DIYNKTGPVKLICWSPDYSVAMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKDPL
KISSMSWGAEGYHLWVLPNKPERRRQEEQQGVEMGELPHSSLQAGILQFHFIKSALTVNP
CTSNQEQVLLHGEDRLYLTCGDPTQVHSTSDSHPHTHLQPCDGSPLHHPPNPDSSLSQGL
STLLGHKHWHVVQIHSTYLESNWPIRFAAIDTAGQCMAVAGRRGFAHYSLFTRKWKLFGN
ITQEQNMTVTGGLAWWNDFVVVACYNFTDQQEQLRLYQRSSNLDNAFASVTKLHSDTLLL
NVFRDMVILFRADCCICLYSIERRNDSPNPSASVELLQEVSMSRYIPHPALVVSVTLTSV
RTETGITLKAPQQACMAESIMLNLAGQLIMLQRDRSGPQVREKETPANNKKLLPFCPPVV
LAQCVENVWTTCRSNRKKRHLLEALWLSCGEAGMKVWLPLFPRDHRKPHSFLSRRIMLPF
HINIYPLAVLFEDALVLGATNETVLYDGLQGSSEPLEALFPYCTVERTSQIYLHHILRQL
LVRNLGEQALMLAQSCASLPYFPHVMELMVHVVLEEEATSREPIPDPLLPTVAKFITEFP
LFLQTIVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVS
RQHATLLFNTALEQGKWDLCRHMIRFLKAIGSGEMETPPPTPTTQEPSSTGGFEFFRNRS
ISLSQSADSITTGKFNLQKTFSMPAGPSAKGRDVECAENMYIDMMLWRHARHLLEQVRLR
DLGCFSAQLGFELIGWLCRERNRVAHVDDFVSALKRLHKDFLWPFPVIPVGSLSSPLKNG
RCRTVLSTRLLKSQSADSLLNSDMDTVPPQAAPTNHNWLVELGQRSKDMDTASSAHSNQH
STQTHDAFLSLLTNKVEEYSIGSATDLTETSSVVDGDWTMVDENSSTLSLSQAELEHISM
ELANKGPHKSQVQLRYLLHVFMEAGCLEWCVVIGLILRDANVIKQVIGFLDSPEVPQETV
QSVRNGLLAVDTWASTDCLGYKPFLNLIQPQLQQLMDSASEQVQPEAFQPTSQSSKLGSS
EGPGGAAVPRAEDSRGVAAPLGLALPSLEPAGGFSRPPSEDCPPEQTEEQGEEEGTYDCT
LS
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atgtattttctaaccggctggccccggaggctgctttgtccgttgaggagtgaagaggag
cccttccacatccagcccagctcccagaggttttacttcgccgtgttgtcagagacacag
ctcagcatctggtttagtcggcctagcgttttgatagtcagctatattgagtctgcaaag
gcagcggcccagtttggcttctaccagaaggcagaatggaaacctgacaactccatgata
gctgtggcgtctgccaaaggctacatcctcctgtttgatgtgctgggtggaggggacgac
aagtacctctatgagcctgtctatccaaagggaagtcctcgtgtgaaagtgaccccgggt
tataaggaggagcaatgtgcccctgccctgtctttagagatgaagaagcctgtggatctg
gaggcccccatcaccagtctgcagtccctccaggaagacctactggtttgtacggcagac
ggctaccttcatgtgctgcactgggatgggctaggcagcaacggccgcaaggccatctgc
ctcactacaatccccttctcgctagacctgcagtctgctcgaggtggtccctctctggac
ttggagggagtgtatatccgttgtatggagtactgtgtgaccctggacggcttcgctgtg
gttctgagtgacggacgcctgggctttatcacaccactcagcaacaccatcaccgcagac
cagctgcagggcgtctgggcagcagacgtcactgatggcacctgtgtggctgtcaacaac
aagtacagactgatggcctttggctgcgccagtggctcagtgctggtgtacatgatagac
accacaacaggatccatgcagctctcccacaaactggagctcaccccaaagcactaccca
gacatctataacaagacgggccctgtcaaactaatctgctggtcaccagactatagcgtt
gctatggttacatgggagtgtggtggcctatcgctgtggagtgtctttggagctcacctt
atctgcactctgggagaggactttgcgtatcgttctgatggtaccaagaaagaccccctt
aaaatcagctccatgagctggggagcagaggggtaccacctatgggtgctccctaacaaa
ccagagaggaggaggcaggaggagcagcaaggggtggagatgggggaacttcctcattcc
tccctgcaggctggcatactgcagttccacttcatcaagagtgccctcacagtcaacccc
tgcacgagtaaccaggagcaggtgttactccatggtgaagaccgcctctacctgacctgt
ggtgaccccacgcaggtccacagcacctctgactcacacccacacacacacttacagcca
tgtgacggcagcccactgcaccacccccccaaccccgactcctctctctctcagggactc
agcactttactgggacacaaacactggcacgtggtccagattcacagcacatacctagag
agcaactggcctatacggtttgcagccatagacacagcaggccagtgcatggctgtagca
gggaggcggggctttgcacactactccttattcacaaggaaatggaagctgtttggaaat
atcactcaggagcagaacatgacggtgacgggaggtctggcttggtggaatgactttgtg
gtggtggcctgctacaattttacagaccagcaagaacagttgaggctctatcaacgctca
tccaacctggacaacgccttcgcctcagtcactaagctacactcagacactctgctgctc
aacgtcttcagagacatggtcatcctgtttagagctgactgctgcatctgcctgtatagc
atagagaggaggaacgacagtccaaacccgtcagccagcgtggaattgctgcaggaggtg
tcaatgtctcgctacatccctcacccggctctagtggtctctgtcacactcacgtcagtg
cgcaccgagactggcatcacgttgaaagcgccgcagcaggcctgcatggcagaaagcatc
atgttgaatctggctggccagttgatcatgctacagagggaccgttcaggaccgcaggta
cgagagaaggagacacccgctaataacaagaagctgctaccattttgtcctcctgtcgtg
ttggcccagtgtgtggagaatgtgtggaccacctgtcgctccaacaggaagaagcgccac
ctgctggaggccctgtggttgtcatgcggtgaagcaggcatgaaagtctggctgccgttg
ttcccccgagaccaccgcaagccccactccttcctctccagacgcatcatgctgcccttc
cacatcaacatctaccctctggctgtgctgtttgaggatgccctggtgctgggggcaacc
aatgagactgtactctatgatgggctgcagggatcctcggagccactggaggcgctgttc
ccctactgcaccgtcgagaggacctcccagatctacctccaccacatccttaggcagctg
ctggttcgcaacctgggtgaacaggctttgatgcttgctcagtcatgtgcctccctcccc
tacttcccccatgtcatggagctgatggtgcatgtggttctggaagaagaggcaacatcg
cgggagcccatccccgaccctctgctgcccactgtggccaagttcatcacagagttcccc
ctcttccttcagaccatcgtccactgtgccaggaagacagagtacgccctgtggaactac
ctgtttgccgctgtgggaaaccccaaagatctgttcgaggagtgtctcatggctcaagac
ctggacacagcagcctcctatctgattatactgcagaacatggaggttccagcagtgagc
agacagcacgccaccctactcttcaacacagcgctggaacagggcaagtgggacctctgc
cggcacatgatccgattcctcaaagccattggctcaggggagatggagactccgccccca
acacccaccactcaggaacccagctcaactgggggttttgagttcttcagaaatcgcagc
attagtttgtctcagtcggcagactccatcactacaggaaagttcaacctgcagaagacc
ttcagtatgcccgctggaccttctgctaaaggtcgggatgtggagtgtgcagagaacatg
tatattgatatgatgctctggcgccacgcccgccacctcctggagcaggtacgccttcgg
gacttgggatgcttctctgcacagctgggtttcgaactcatcggctggttgtgtcgcgaa
cgaaaccgtgtggcccatgttgatgactttgtttcggcgttgaagagactccataaggat
tttctgtggccattccctgttattcctgtgggaagcctcagctcgccgctgaagaacgga
cggtgtcgcacagtgctgagcacacggctgctgaagtcgcagtcagctgacagcctgttg
aacagcgacatggacacagtgccccctcaggcagcccccaccaaccataactggctggtg
gagcttgggcagaggtccaaagacatggacacggcctcttctgctcactccaaccagcac
tcaacacagacacatgacgccttcctgtcactgctcaccaacaaagtggaggagtacagc
atcggctcggccacagacctgacagagaccagctcagttgtggacggtgattggacgatg
gtcgacgagaactcctccactctgagcctgagccaggctgagctggagcacatctccatg
gagctggccaacaagggcccacacaagtcacaggtgcagctcaggtacctcctccatgtg
ttcatggaggcgggctgtctggagtggtgcgtagtgatcggtttgatcttgcgggatgca
aatgtgatcaagcaggtgatcggcttcctggacagcccagaggttccccaagaaactgtg
cagagtgtccgaaacggcttattggctgtcgacacgtgggcctccactgactgcctgggg
tacaaaccatttctcaacctgatccagccgcagctgcagcagctgatggactcggcgtcc
gagcaggtgcagcccgaagccttccagcccaccagccagagctccaaactcggcagctct
gaagggccgggaggtgctgctgtaccacgagccgaggacagcagaggagtagcggctcct
ctgggcctggccctgccctccctcgaacctgcaggaggattttctcgccccccctctgag
gactgtcctcctgaacagacagaggagcagggcgaggaggagggaacctacgactgcacc
ttgtcctga
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