Xiphias gladius (swordfish): 120806265
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Entry
120806265 CDS
T07311
Symbol
pum3
Name
(RefSeq) pumilio homolog 3
KO
K14844
pumilio homology domain family member 6
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120806265 (pum3)
03009 Ribosome biogenesis [BR:
xgl03009
]
120806265 (pum3)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120806265 (pum3)
Ribosome biogenesis [BR:
xgl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
120806265 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
RXT2_N
CTD9
LprI
Motif
Other DBs
NCBI-GeneID:
120806265
NCBI-ProteinID:
XP_040013159
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Position
LG20
Genome browser
AA seq
657 aa
AA seq
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MNEAKSKKPFSPKGGKKQKLTQKGKDSIGTKLGGKPGGKPGGKKPFKPYNNTERKSRPGK
GRDGGKKEHKFAFSKAGNGPNKRKLHPVRDEEDGGGPVAKRMKKGEFKPKKELTEEELKK
NRQQRKKDLKKSRQQADRKDMFQIICQSKRVWGDLRRKDCDNDLKKKLMKELHDLMRGKI
RQMAFAHDSVRVLQCFIQFGSHEQRQEVFDELKEDIVGLCKSQYGRHVVKKLLMYGNKEL
LASVMQTFKGHVRPMLRHAAASSIIEYAYNDKAVLAQRLMLTEELYGNTFTVCKSSVCNT
IEKVAETNPGKLNNIIDEMKQILTPMAQKEQVIKHSLVHKVFLDFFLFAPDKQRTEMIES
IRESVVYMAHTHDGARVAMHCLWHGTAKDRKVIIKTMKTYMVKFATGEYGHLVLLALFDC
VDDTKLVKQAVLSEILSSLDEVIGNKYGKKVLLYLLSPRDPAHLLPEIIKVLEQGDGNAH
SKKDSAIRRKELLEVVSPPLLEYLRDNAATMVMDKATSVTVSDILASACGDLRPAMTAVA
QLANQELVPGGTNKELHMAEHPAGHLVLKWLIEQDMTLAEAGKEERFGRILVDTVGTDKL
KSWVKVNRGAMVLCSLLNSYDKSVSTEVKEVLKSITSELRGISNNKGVEILLENLNK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggccaaatccaaaaaacccttttctcctaaaggtggaaagaaacagaagctt
acacagaaaggaaaggattccatagggaccaaacttggtggaaagccaggcggtaaacca
ggcggtaagaagcccttcaaaccgtacaacaacacagagaggaagagcagaccagggaag
ggtagagatggtggcaagaaagaacataaatttgctttctccaaagccgggaatgggccg
aataagaggaaactgcacccagttagagatgaagaagatggtggaggtccagtggccaag
aggatgaagaaaggtgagtttaagccaaagaaggagctgacggaggaggagctgaagaag
aacaggcagcagaggaagaaggacctgaagaagagcagacagcaggcagataggaaggac
atgttccagatcatctgtcaatccaaacgagtgtggggagacctcaggaggaaggattgt
gacaacgacttgaagaagaaacttatgaaggagcttcatgatctgatgcgcggcaaaatc
agacagatggcatttgcccatgactcagtgcgagtgctgcagtgtttcatccagtttggc
agccacgagcagagacaggaagtgtttgacgaacttaaagaggacatcgttggtttgtgt
aagtcgcagtatggcagacacgtggtgaaaaaactgctgatgtacgggaacaaggagctg
ttggcatctgtgatgcaaacttttaaaggtcatgtgcgcccgatgcttcgccatgccgct
gcctcctccatcattgaatatgcctacaatgacaaagccgtgctcgcacagagactcatg
ctcactgaggagctatacgggaacaccttcactgtctgcaagtcgtcagtgtgtaacacc
atcgagaaagttgcagagacaaaccccggcaagctgaacaacatcattgatgagatgaag
cagattctcacacccatggcccagaaagagcaggtgatcaaacactctctggtccacaaa
gtcttcctggacttcttcctgttcgcccccgacaaacagagaacggagatgatcgagtcc
atcagagagtcagtcgtctacatggctcacacacacgacggagcacgagtggcaatgcac
tgtctgtggcatgggacagccaaggacagaaaagtcatcatcaaaactatgaagacttac
atggtgaagtttgccacgggggagtacggtcacctggttcttctggccctatttgactgt
gtggacgacaccaagctggtcaaacaggcagttctctcagagatcctgtcgtctctggat
gaggtcatcggtaataaatacgggaagaaggttctgctgtacctgctgagccccagagac
ccggctcacctgctgccagagatcatcaaggtgttggagcaaggagatggaaacgcacac
agtaaaaaagactcggccattcgaaggaaagagctgctggaagttgtgtcccccccactt
ctcgagtatctccgggacaatgccgccaccatggtgatggacaaggccaccagtgtcacc
gttagcgacatcttggcgtcggcctgcggggacctgcggcctgccatgacggccgtggcc
cagctggccaaccaggagttagtgccgggagggaccaacaaagagctccacatggccgag
catccagcaggacacctggtgctgaaatggcttatagagcaggatatgacactggcagag
gcaggaaaggaagagcggtttggcaggatactggtggacacggtgggaactgacaaactg
aagagctgggtgaaagtcaacagaggagccatggtgctgtgcagcctcctcaacagctat
gacaagtctgtgtccacagaggtgaaagaggtgctgaaatccatcacatcagagctccgc
ggcatcagcaacaacaaaggagttgaaatcctgctggagaatctgaacaagtag
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