Xiphias gladius (swordfish): 120806292
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Entry
120806292 CDS
T07311
Name
(RefSeq) transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120806292
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
120806292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
120806292
NCBI-ProteinID:
XP_040013216
LinkDB
All DBs
Position
LG20:20471340..20487566
Genome browser
AA seq
2378 aa
AA seq
DB search
MFRRSRFSIRPNVGTAGRTAATPQEAPAASQEASETPRDISESSTPTAVADTKSVVTPSE
TPIAPGDGNDQNGEGTGSAAAVQRRKRFSVKPKVAPGRPSTLARTPKSPVKTAPEIPVEG
PGPDLDNPTASSQTATTAAPKGLQSPRRRRPSEESKQPKVQPKPTPISSDSSGPSAVPLA
EESPEQTDLPTDSDRHLESKAGSQVKEVPPRLPNKVPPSLPDKEAVEVSEKAKTLVSSKS
GLSLSPSAFSLSRLLNDPSDLQRLAKAQKLRELLRQERHKEKKLRKAKARAKEYTLDPAK
MTMRDLIRYLPMSNPMTSSLEDSAQENETVVPPSPEREESPERAQEPEVLPKMASPREEE
EEEVAEEEQEEALMVPQVKVAEDGSLIIDEESLTVEVQRAKGPNPAQDRDPIFERGSTTT
YSSFRKGTYSKPWSSEETDMFFLAISMVGTDFSMICQLFPHRARSEIKNKFKKEERENAW
RIDKAFRERRKLDIEYFSKLLEKILEVQKNRKKLKSLAEKNSPRKLKRKAKGKKAARKLS
DVEEEDEEDDNQVPELEDEEEGEKENDGEAPVSKPKKPRKRKNRKAALNEEPNDKKSKTA
EDSNDQDEVCIPEDSGAALPEDHTSSETSEKTENVNASKDTAVKPAKLSRGRAPKPLLPL
GRKWGKKPPPPSTKAEDTASDKGDESVTDGASKEQVNKDSSPLRQANKWKSANADDTSEE
EDATVQPPRPTRYGRVPKPTKPLTYPAKEDAQTSASETTPTSPVGSTASAAKPKPKYAAK
RGRSSKQQSTQESKKPKLVTLRASQSEYSDEEDEKQQDHEEIEEEEHPSGSPSKDSSAPV
FVPASLRSPHPVISEVEETMEELDILANMPDVLGISQDALCPDASCEQAQNETGTVEPCE
HQLDLLVDVIDFLSSEHTEVSEDESYNEAAQTLLTIGNLTHLPQSAQNQIATQDHTTGTT
SVSVKETRQELDEETASKPAAQEENGTTPLISGHGVTETSETIATVEPQNSTTDNGAVPI
IETSDQMCGEQKTISDMDPSLQLQSSPEGSKKNSAQPKRGRLSKVKPKPNLGRASRTAQP
KSQTDTSTEQTAEENNADAANLQVTESLSVSEETTPKITEYSPPLLIDDVSCDEVKLTKE
FPVSQERSVDEVESGAAKSDQSASENTASHCFSDAQFEPSREQASRDTTSTSESSNEKRI
TSCFNNSATSDTSVAESQVEHESNTDCVTVQEDSQHSVAFVTPLEDLPVSQKESEVTQST
CQFKRSRLQKVKPKPNLALMSRTARSKPQTTKDSLEKDSSPTPISNIHEKTIVEDEPEAT
CGTSPEKPSKSTGPASVLIPSLQLGCTLTPAKDLSKTEEKRTDVGLVGQVCSGAGTSDQS
GSENQSISEAPFEPSIKDTGSTSESTDKKGTIQDGTTESSNNLVTSGSAVTELKVGQDSP
PVQESSEHPATCVTPVEDLPIICKDESVASACQTRRGRLQKVKPKPNLAQISRTARSKPQ
TMKDPVTHMQLVERPSSPISKPGSSDNTLAEVEAQPICSITVPVKPSQSTCNASVSVPSL
ELCTTHKPTEESSSTMEQKTDVEPNSSSESSEPNVPQRRRHFPKVKPNLGSSTRTTETKL
QPKNISKPSEQHYMDTSSNVTSEQQPADNSQTELKLAENDCKRLTHCTLNTELISTKSAP
AESEKTLDSTNDKGTSSDGIVIATSWVAENQSVLTDSVPENKSSEKFTFERESTGDKMST
NDRVDVGPASQGDCKLDMSTGVTESNTQPPDDATAASDVQYSEDGSTESKLNYVLAASPY
LIPDPKQSSHQPWPESDSEVQSQDITQRCSETRETNQISNDNSQYAQSTDETQSELTDSF
ESSNKALQTHRGRLIKPKPNLGCSSQPPQPQQVQNTTKAEADSGTSSEGVDASVSYKPVS
KSQPDIQAPVEEAIEPQSNQESPSDDAGSLMGCLSHIIEQLSQHDSPPDDAGSSLSCVTQ
VPDNSSQNTSTLNTEGTQSHPSLTIFPDMLSAQVPSDPDEPFFILSLTEIPVSSSGEVMD
SAAGPLPYHRVADESTQQQSGVPGESLAATRDGSLSNVPVPVSTEESGEMGLISVKDTGP
DTAAHIDLIMENPVDPHESTTVQPPKLPETVEINDETEVPPTKKRLTGTGRRTKLQVKPN
TTRKKQASKALSTNTNQDSELPGSSMQREASDASTKVGDEVVAEPQERSGDLVNIEKEIP
AGGKGPEDSSSVVETQTTTTKGTSIENSTAPSSDLSPGKAAPTGPKVKTTHTMRKHSTPT
PVASTSHNVVPTPSPTKLPEETHSASSTASPTLTEVDIGQTTELNRLCSDPTASTSQCTA
EVSASQQSDCVESSSIEEEPTSVSQYFLSDIFTEVEEG
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgccggtcaaggtttagtattcggcccaatgtcggtacggcagggagaacagca
gcaacacctcaggaagcccctgcagcaagtcaggaggccagtgagacccccagagacatc
agtgagagcagcactcctactgctgtggcagataccaagtctgttgtgactccatcagag
acacctatagccccaggggacggcaatgaccaaaatggggaaggtacgggttccgcggct
gcagtccagagaaggaagcggttttctgtcaagcccaaagtggccccagggcgcccctcc
acccttgctcggacgccaaagtcccctgtcaagacagcccctgaaattcctgttgaaggc
cccggcccagaccttgacaacccaacagcatccagccaaactgcgactacagcagcccct
aaaggactccagtccccaaggcgacgaaggccttcagaagagagcaagcagcccaaagtg
caacctaaacccacccccatctcgtctgactcttcaggaccttcagctgtccctctagct
gaggaatcaccggaacaaactgatctgccaacagacagcgacagacacttagaaagcaag
gcaggcagtcaggttaaagaagttcctcccagactaccgaataaagtccccccctctcta
ccagacaaagaagctgttgaagtatcagagaaggccaagactctagtttcatctaagagt
ggactttcactgtcaccatcggcgttctccttgagtagactcctgaatgacccatccgac
ttacagaggctggcaaaggcccaaaagctcagagagttgctcaggcaggagaggcacaaa
gaaaagaaactcaggaaagctaaggcacgtgcaaaggaatatactttagatcctgccaaa
atgaccatgagggaccttatccgttatctcccaatgtctaaccccatgacatctagttta
gaagactcagctcaggagaatgagactgtggtccctccttcgccggaaagagaggagtct
ccagagagagcacaggaacctgaagtcctccctaaaatggcaagtccgagggaggaggag
gaagaggaggtagcagaggaagagcaggaggaagcgctcatggttccccaggtcaaagta
gcagaggatggctcactgatcatcgatgaagagagcttgacggtggaagtccagcgagca
aaaggaccaaacccagcacaggatcgagaccccatctttgagcgtgggtccactacgact
tactcaagcttcaggaaaggaacctattcgaaaccctggtccagtgaagagacagacatg
ttcttcctggccattagtatggtggggacagacttctccatgatttgtcaactttttcct
cacagagctcgatcagagataaagaacaaattcaaaaaagaagagcgagagaatgcctgg
aggattgataaagctttcagagagaggcgaaagctggacatagagtatttttctaagctg
ctagagaaaattctggaggttcagaaaaacaggaagaaactcaagtcactcgctgagaag
aactcccccaggaagctcaagagaaaggcaaagggcaaaaaagctgcaaggaaactgagc
gatgtggaggaggaagatgaggaagatgataatcaagttcctgaattggaggatgaggag
gagggagagaaagagaatgatggagaagcccctgtttctaagcctaagaaaccacgcaaa
agaaagaatagaaaggctgccttgaatgaggaaccaaatgataagaaaagcaaaacagct
gaagacagtaatgatcaagatgaggtgtgcatacctgaagactctggggctgcacttcct
gaagatcatacaagttcagaaacgtctgaaaagactgagaatgtgaatgcatccaaagac
actgcagtcaagccggctaaactctcacgaggcagagcaccaaaaccactacttcctttg
ggccgcaagtggggtaaaaagcctccaccaccctccacaaaggccgaagatactgcgtca
gataaaggggacgagagtgtgactgatggagcctctaaagagcaggtaaacaaagattca
tcacctttaaggcaagctaataagtggaagtcagccaatgctgacgatacctctgaagaa
gaagatgccaccgttcaacctccaagacctaccaggtatgggagagtgcccaaacccacc
aagcctttgacttaccctgccaaagaagatgcacaaacctctgcatctgagaccactccc
acctcaccagtagggtccactgcttctgctgccaagcctaaacccaaatacgcagcgaag
aggggaagatcatcaaagcaacaatcaacccaagagtccaaaaagcccaaactagtcacc
ctcagggcatctcaatcagaatacagtgatgaggaggatgaaaagcagcaggaccacgaa
gagatagaggaggaggagcacccttcaggtagccccagtaaggacagcagtgcccctgtg
tttgtgcctgccagtctgcgttctccacatcctgtgatttcagaggtagaagagactatg
gaggagcttgatatcttggccaatatgcctgatgtgttgggcatctcccaagatgccctt
tgccctgatgcctcttgtgagcaggcacaaaatgagacgggcacagttgaaccatgcgaa
catcagttggacctgctggtcgatgttatagacttcctttcttcagaacacacagaagta
tctgaggatgagagctacaatgaggctgcccaaaccctgttgaccattggcaacctgact
catctccctcagtcagcacagaaccaaatagctacacaagatcacacaacagggacaaca
tcagtaagtgtgaaagaaaccagacaagaactagacgaagaaactgcatcaaagcctgct
gcacaagaggaaaacggtaccactcctctcatttctggtcatggagtcacagaaacatca
gagactatcgctactgtagagccacaaaacagcacaacagacaatggtgctgttcccatt
attgaaactagtgatcagatgtgtggtgagcagaagactatttctgatatggaccctagc
cttcaattacagtcaagtccagagggctcaaagaaaaattctgcacagcccaagagagga
cgcttatccaaggtgaaacctaaacctaacctaggccgagcctcaaggactgcacagccc
aaatcccaaactgacacatcaacagaacagacagctgaagagaacaacgcagatgctgcc
aaccttcaggtcactgaatcactatccgtttctgaagaaacaacccctaagataacagaa
tattctccaccattgttaatagatgacgtttcctgtgatgaagtcaaacttacaaaagag
tttcctgtcagtcaggagaggtctgtcgatgaggtagaatcaggtgcagcaaaatcagat
cagagtgcctcagaaaacactgcgagtcactgcttttctgatgcccagtttgaacccagt
cgggaacaagccagcagggacacaacgtcaacatctgagtcctcaaatgaaaaacggatt
acgagttgctttaataattcagcgacatctgacacatcagtcgccgagtcacaagttgaa
cacgagtcaaacacagattgtgttacagtccaagaagacagtcaacattctgttgctttt
gtcacacctttagaagatttacctgtcagccagaaagagagtgaagtaacacagtctact
tgccagtttaaaaggagtagattgcaaaaagttaaacccaaaccaaaccttgcactgatg
tcaagaactgcacggtctaaacctcaaaccacaaaagactctttagagaaagactccagc
ccaactccaatctccaacatccatgaaaaaacaatagtagaggatgaaccagaagcaact
tgtggcacttctcctgaaaaaccaagtaaaagcactggtcctgcttcagttttgatacca
tcattacaattaggctgtactcttacacctgcaaaagatctgtctaaaactgaggagaaa
aggacagatgttggacttgttggtcaggtatgctctggtgctggaacatcagatcagagt
ggctcagaaaaccagagcatttctgaagccccttttgaacccagtatcaaagatacagga
tcaacatctgagtccacagataaaaaagggacaattcaagatggtacaacagagagtagt
aataacctggtgacatccggctcagctgtcacagaattaaaagttggacaagactcaccc
ccagtccaagagagcagtgaacatcctgctacatgtgttacacccgtagaagatttacct
atcatatgtaaagatgagagtgtcgcatctgcttgccaaactaggagagggcgattacaa
aaagtcaaacccaaaccaaacctagcacagatatcaagaactgcacggtctaaacctcaa
accatgaaagaccctgttacgcacatgcagcttgtggagagaccctccagcccaatttca
aagcctggatcttctgacaatacattagcagaggtagaagcacagccaatttgtagtatc
actgttcctgtaaaaccaagtcaaagtacttgtaatgcttcagtttcagtaccatcattg
gaattatgcactactcataaacccacagaggaatcatcctcaactatggaacaaaagaca
gatgttgaacccaactcaagctcagagagttcagaaccaaatgtaccccaaagacgacga
cacttccccaaggtcaaaccaaatttaggatcatccaccagaactacagagacaaaactg
cagccaaagaatattagtaaaccctcagaacaacactatatggacacctcttcaaatgta
acctcagaacaacaacctgcggacaattcacaaacagaactgaaacttgcagagaatgac
tgcaagcgcttgacacactgtacattaaatacagaactcatctcaacaaaatctgcacct
gcagagtcagaaaagacactagacagcacaaatgataagggtacgtcttctgatggtatt
gtcatagcaacatcttgggttgctgagaatcagtctgtgttgacagactcagttcctgaa
aataaaagcagtgagaaattcacatttgagagggaatccacaggagacaaaatgtcaacc
aatgacagggtagacgttggacctgcttcacaaggggattgcaagctggatatgtccaca
ggagttacagagtcaaatacccaacctccagatgacgcaactgcggcttcagatgttcag
tattcagaagatggctccacagagtcaaaactaaattatgtattggctgctagtccctac
ttaataccagatccaaaacaaagcagccatcagccatggccagaaagtgactcagaagta
caaagtcaagatataacccaacgatgttcagagaccagggaaactaatcaaatatcaaat
gacaactctcaatatgcacaaagcacggatgaaacacagtcagagctgactgactccttt
gagtcttcaaataaagcccttcaaactcacagaggcaggcttattaaacccaaacccaac
ctgggatgcagcagtcaacctccacaaccccaacaagtccagaacacaacaaaagcagaa
gcagattctggtactagctcagaaggtgtggatgcttcagtttcctacaaacctgtgtct
aaaagccagcctgacattcaggcaccagtagaggaagctattgaaccacaaagtaaccaa
gagtccccctcagatgatgctgggtcgttgatgggctgcttgtcacatattattgaacaa
ctgagtcaacacgactcccctccagatgatgctggatcctctttgagttgtgtgacacaa
gtaccggacaattcttctcagaacacatcaacattaaatacagaggggacacaaagtcat
ccaagtctcacaatatttccagacatgctgtcggcgcaggtgccttcagatccagatgaa
ccgtttttcatcctctcactgactgagatcccagtctcttcatcaggggaggtgatggac
agtgcagctggacccctcccttatcatcgtgtggcagatgaatcaacacagcaacagagc
ggtgttcccggagagagtttggcagcaacgagagatgggtctctctctaatgtccctgtg
cccgtgtccacagaggagagtggtgaaatgggcctaatcagtgtaaaagatactgggcca
gacacagctgcacatatagatttgatcatggagaatccagtggatccacatgagagtact
acagttcagccgcccaaattacctgagactgtagagattaatgatgagactgaagtcccc
cctacaaagaagagactaacaggaactggaagaagaaccaaactgcaggttaagcccaat
actacaaggaagaaacaagccagcaaggctctttctacaaacaccaaccaggactccgaa
cttcctgggtcttccatgcagcgagaagcctctgatgcatcaacaaaagtgggcgatgag
gtcgtcgctgagccacaggaaagaagtggtgatcttgtaaacattgaaaaggagattccg
gcaggtgggaagggccctgaggatagcagctcagtagtagaaactcagactacaacgact
aaggggacaagcattgagaatagcactgccccttcaagtgatctttcacctggcaaagca
gctcccacgggccctaaggtcaaaaccacacacacaatgagaaaacactctaccccaaca
cctgtagcttcaacatcacacaatgtcgttcccacacccagtccgacaaagctgccagag
gaaacccactcagcatcctctaccgcttcacctacactaacagaggtggatattggacag
accactgaactaaaccgactatgttcagacccaactgctagcacttctcagtgtacagct
gaggtttcagcttcccagcaaagtgactgtgtggagagcagctctatagaggaggagccc
accagtgtgtctcagtacttccttagtgatatatttacagaagtggaagagggataa
DBGET
integrated database retrieval system
