Xiphias gladius (swordfish): 120806296
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Entry
120806296 CDS
T07311
Symbol
itga1
Name
(RefSeq) integrin alpha-1 isoform X1
KO
K06480
integrin alpha 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04510
Focal adhesion
xgl04512
ECM-receptor interaction
xgl04810
Regulation of actin cytoskeleton
xgl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120806296 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120806296 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120806296 (itga1)
04810 Regulation of actin cytoskeleton
120806296 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120806296 (itga1)
04515 Cell adhesion molecules [BR:
xgl04515
]
120806296 (itga1)
04090 CD molecules [BR:
xgl04090
]
120806296 (itga1)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120806296 (itga1)
Cell adhesion molecules [BR:
xgl04515
]
Integrins
Integrin alpha subunits
120806296 (itga1)
CD molecules [BR:
xgl04090
]
Proteins
120806296 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
VWA_2
Integrin_A_Ig_1
Motif
Other DBs
NCBI-GeneID:
120806296
NCBI-ProteinID:
XP_040013227
LinkDB
All DBs
Position
LG20:17607566..17668762
Genome browser
AA seq
1188 aa
AA seq
DB search
MLGINQHFTLTAAAVAVLLAHALSFNVDQKNGLSFSGPLEDMFGYTVQQFENSEGKWVLI
GSPLSGQPAKRTGDVYKCPVGKGDNTCVKLELPENTTVPNLNEVKENMTMGTTLVTNPNG
GFLACGPQYGYMCGQQQYISGVCANVSSSFQILNSVAPAVQECAKELDVVMVLDGSNSIY
PWTSIINFLQRFIVKMQIGPKLSQVGIVSYGETVTHRVNLSQFDNTRDLLEFVKELPQQT
GFKTMTFLAIDTARREAFMPERGARPGVKKVMVIVTDGESHDRHNLEKVISACDNDNIER
FGIAVMGDYNRQNKSKEEVQKFIKEIESISSPPLRDHFFNVSDELALLTIVDALGNRIFA
LEATTGNFTSSFEMEMSQAGFSAHTSKEGVLLGAVGAYDWNGTVVMHTAGGTIIPGKNQF
HDPKSEAGYERLAGYIGYDVQSASTPEGVLYITGAPRYNHTGRVVIYRLNEMNEVVVSQI
LKGEQIGSYFGSVLQTVDVDGDSYTDLLLVGAPMYMGSERDEQGQVYVYTVKQDGHFKHE
FTLKPVNQSCCTAHSASCHNKNEPCGARFGTAIAAVSDLNKDGFNDVAIGAPFENDHRGA
VYIYHGDKMSLKEKFVQRIPAGGDGEKVKFFGQSIHGVMDLNGDGITDVTIGGLGGASLF
WSRDVAELRANMTFDPVKINLQQAQYQCEHGGRKSVCVTTEVCFVYSIKSDKQDLKAAFV
PVRYDLTLDALRAKARASFIDSDDKSDRKIAKGLIIKHGGTFCVQETFMMSARLDFRDPL
MVSLEFGLADEDQGPVLDESLPRAINKTIPLVDCGSDDKCIADLSLKAEPSVKSMVITSK
KDKIDVNINIRNSKDNAYNTKVILNFTPNINYVKVEPEKGCSLNHTKVECAVGYPFLGSN
VEENFKVKFEMNPKHIQEVIQINVTATSDSEELASTLHDNTVQISIPVKYEAGILFSAQL
AAEHIVVKEGEQYASVFNDTRMIGEEINVNYTVVKTTDVLAPPLDLTVTYPHLSPRQNNL
LYLTHITTSPQVKCDAARWINPYKINPEIREPNPHKETLSVFLLTCSAELYCASFTCSIP
ETRISHVNVTFRLWKPTFIKGEFSYLHMLVNGTLGIKNTNLFELNRSDTSRIVKIQVSKE
TLGGIPIWVIIISILIGLLILALVIFALWRFGFFKRKSRDYTKDEITD
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggataaatcagcatttcactttgactgcagcggcagtcgctgtgctgctggcg
catgcgttgtccttcaacgtggaccagaaaaatggtttgtcattcagcgggccactggag
gacatgttcggctacaccgtccagcagtttgagaacagcgagggaaaatgggtcctgatt
ggatcaccgctgtcgggccagccagctaaacggacaggagatgtctacaaatgtcctgtg
gggaagggggacaacacatgtgtcaaactggagctgcctgaaaacacaacagttcccaac
ttaaatgaagtcaaggagaacatgaccatgggaaccacactggtgaccaatcccaatgga
ggatttctggcgtgcggtcctcagtatggctacatgtgtgggcagcagcagtacatctca
ggagtctgtgcgaatgtcagctcttccttccagatcctcaactctgtggcgccggccgtg
caagagtgtgcgaaggagctggacgttgtgatggttctggatggatctaacagtatttac
ccctggaccagtatcatcaactttctgcaacgcttcatcgtgaaaatgcaaattggacct
aaactctcacaggtgggaatagtgtcctacggtgagactgtgactcaccgtgtcaacttg
agccagtttgacaacactcgtgatctgctggaattcgtcaaagaacttcctcagcagacc
ggcttcaagacgatgaccttccttgccattgatactgccaggagggaggccttcatgcca
gaacggggtgcacgacctggggtgaagaaagtcatggtgattgttactgacggagagtca
catgaccgccataatctagaaaaggtcatcagcgcctgtgacaatgataacattgagagg
tttggcattgctgttatgggagactacaatcgtcagaacaaaagtaaagaagaagtgcag
aagtttatcaaggagattgagtccatctccagtccgccattaagagaccacttcttcaac
gtgtctgatgagctggcgctgttgaccattgtggatgctctgggaaacaggatttttgcc
ttagaagccaccaccggcaatttcacctcctcctttgagatggagatgtcccaagctggg
tttagtgcacacacttctaaagaaggcgtgttactgggagcagtgggagcgtacgactgg
aacgggacggtggtaatgcatactgcggggggaacaatcattccagggaagaaccagttt
cacgacccaaagagcgaggccgggtatgaaagactggctgggtacattggatatgatgtt
cagtcagcatccacccctgagggagtgctgtacatcacgggtgccccgcggtacaaccac
acaggccgggttgtaatctaccgcctaaatgaaatgaacgaggtcgtcgtgtcgcagata
ctgaaaggagaacagattggttcctactttggcagcgtcctgcagactgtcgacgtggac
ggggattcctacacagatctcctcctggtcggagcgccgatgtacatgggctcagaaaga
gacgagcagggacaagtctatgtttatacagtcaaacaggacggccactttaagcacgag
ttcactttaaagcctgtcaatcagtcctgttgtactgcccactcagccagctgccataat
aaaaatgaaccctgcggtgcccggtttggtacagccattgcagcggtgtcagatctcaac
aaggacggatttaatgatgtggcaattggtgcaccgtttgagaacgatcaccgaggagcc
gtctacatctatcatggagacaagatgtcactgaaagagaaatttgtgcagcggatcccg
gcaggtggggacggtgaaaaagtgaaattcttcggtcagtccatacatggagtcatggat
ctaaatggagatggaatcactgatgttactataggaggtctgggaggggcgtcactgttc
tggtccagagatgtcgccgaactccgcgccaacatgacttttgaccctgttaaaataaac
ctgcagcaggcacagtaccagtgcgaacatggtggacgcaaatctgtgtgtgtgacaact
gaagtgtgtttcgtctacagtatcaaatctgacaagcaggacttaaaagctgcctttgta
ccggtccgctatgatttgactctggatgctctgcgtgcaaaagccagggcctcatttatt
gactcggatgataaaagtgatcgtaagattgccaagggcctcatcatcaaacacggaggc
acattttgtgtgcaagagaccttcatgatgtcggcccggcttgatttccgagacccgctc
atggtgtctctggagtttggactagctgatgaggaccaaggccccgtcctggacgaaagc
cttcccagagccatcaataagacaattcccttagtggactgtggcagcgatgacaagtgc
attgctgacctctctctcaaagcagagcctagtgtgaaaagcatggtgatcacatcaaaa
aaagataagatcgatgtgaacatcaacattagaaacagcaaagacaacgcatacaacacc
aaagttatcctcaacttcacgccgaacatcaactacgttaaagtagagccggagaaggga
tgttctctgaatcataccaaagtggagtgtgctgttgggtacccgttcctgggaagcaat
gtcgaggaaaatttcaaagtgaaatttgagatgaatcccaaacacattcaggaggtaatt
cagataaatgtgacagcaacaagtgacagtgaggagctggcttccaccctgcatgacaac
acagtgcaaatctccatccctgtgaagtatgaagctggaatcctattttcagcgcagctt
gcggctgagcacattgtagtaaaagagggtgagcagtatgccagtgtattcaatgacacc
aggatgattggagaggagatcaacgtcaactatacggtggtgaaaacaactgatgtgttg
gctccgccccttgacctcacagtgacgtatcctcatctgtcgcctcggcagaacaacttg
ctgtacctcacacacataaccaccagcccacaggtgaaatgtgatgcagcgcgttggatt
aacccctataaaattaacccagagattagagagcccaatccacacaaagaaacactcagc
gtcttcttactgacctgctctgcagagctttactgtgcctcttttacctgctccatcccc
gagactaggatcagtcatgtcaatgttacattcagactgtggaaacctacattcattaag
ggggagttttcctatctgcacatgttggtgaatgggactctggggatcaaaaacacaaac
ctgtttgaactgaacaggagtgacacgagcagaattgtgaagatccaggtttcgaaggag
actttaggaggaatccctatttgggtcatcataatcagcatcctgataggactgctgatc
ttggcacttgtcatcttcgctctttggaggtttggcttcttcaagagaaaatccagggac
tacacaaaggatgaaataactgactga
DBGET
integrated database retrieval system
