Xiphias gladius (swordfish): 120806339
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Entry
120806339 CDS
T07311
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120806339 (arhgef28a)
Membrane trafficking [BR:
xgl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120806339 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank_2
SOS1_NGEF_PH
PH_13
PHD
C1_2
Prok-RING_1
PHD_4
DUF2205
Motif
Other DBs
NCBI-GeneID:
120806339
NCBI-ProteinID:
XP_040013318
LinkDB
All DBs
Position
LG20:19980544..20021746
Genome browser
AA seq
1749 aa
AA seq
DB search
MEVNRREVPLYGQVEAIVRLQASAPEDAEFYVVVQGSRLTHVTAAKRRDDGLTLCFTVPG
HDLVEAVSVSFYFYAEDQVKPCEGEASLEYLRDVAQEAAEYLSAHRDHLGPESYLDVLKR
FSIWAQAADEELSAGGLDRDDEDVRLRESRGDEAGLRHLDEKITQAMANMDYPQQWKNTD
RQPREAAELQPKETLLHLAVRLGLVHLSRFLIHQPRGQRALTLRNQEGETPLQLAQKDGQ
HTMFRVLAAPPGPVVGPAPGVCSVWSDSSCALRFCPGTNSLTLTVRHAPGSCPQDGIMVL
RDRLLDHSILELINMLRADTEVDKRSKHEVLSNDEGVSKELRVEEHVLVDNVFEEQLVLS
LDDDDDEEEYSSSSSVNGHPMKSSAVQSQFTQHATDPLLSMINSNDQTITHQTQAVDVDL
KYSVSAVTRDSTGTDSGLWDSQDLLLATDTPPPYSENFHPHSVPCSLPLSPADQALARPN
PISFEPTNERDSPPMDTCDLSPSLVALEVDSEEDSTELKSPLSPLSSPVEKSEDKRDAFR
PSPDLTCTHSQSASSPSEPTTKELGDQGIRLRSYSYSSPKITLRPARFARDNHTSDISPD
AVLHSVSHSRSLLQALSLSKSLSLLHPGKQRASSISEQSHEKRIEEEELDKYNIPTKVES
EKYKVIRTFSFLKSRMSSTRNKTKAKGKDREAKDRQLNGHRFATGACLGPTVCVVCDKPA
SGKDLLHCSSCTAIVHKGCKESVPPCLKKLQDKYAVTMVKNRTASLPQNFTVRDSPPQCV
IPISTSLPVMTPKEKKDTVTQSCSLSGSFPNSDSRLSESSETESDAVRVTSQSEELLPTP
MSSTSTDSSFGEDCVDGYIQSDILADAVDYEAETWSLAVEHKFCKRQDKRAVKRQDVIYE
LMQTEIHHLQTLHIMAEVFRRGMREEVQLDTEAVKRVFPCLDQLILFHHTFFAAMRERRH
SSAQPQGHRNYLIQRVGDVLLQQFSDENGEKMKQVYGEFCSRHNEAVSFFKELQQNNKRF
QIFIKQQGNNSLVRRREIPECILLVTQRITKYPVLLERILQYTQEDTEEHAGLSKALAKI
REVIAAVDLRVSEYERHQRLQEVWSRMENRSSAKLKNGHTFRKQDMMGPGQTLKHQGLLL
WKTATGRLKDVLALLLTDTVIFLQEKDQKYTFATVDQKPPVIALQKLIVREVANEERGMF
LISASAAGPEMYEVHTSSKEERNTWMRLIREAVESCPEEEEEYTSESEEEKRAAEARIQK
INKLQESLLSQDQQICSSLEDKLQIYTELSALSGRTDASAVEPRLLVQPHSEELPQPAVL
LAAALQEAENLKTTLSSKARPASSHSPDSDTDYEFPVSPATLVELPSGSSEPSIENPEAS
EGSWTEAPVLQSPAQLQKTNRDDIDSKVAQSVQSLTQLLYSLQAAVTIQDSCYEVQRLLL
RETGRRSPHAQRPYLPSIRGNTLQEQEKQRNLEKQKEEVVAAQRLQDRLRQEKERWERDC
QARESQQGEQESRLEEREKQCHLEAERLRREREELDEQLEEYQQSLERLREGQRSVERER
ERLENQQKLLQTWRHSRQRSLPAVIPHMVIPLDGQQDSVAGQPRDHAGNGSMFVNEAAFV
STSINNRHVHHKRNDPSAHNCLNTLLARSNSRQPPIAKAPHNPHSASQGWVMGRGYLYSP
AGRLGLQRIPDDHNSHSYIGETWSSTASGSDPYPELPHPSDHQLDLSALVSLETDSGGEE
GREETIVYL
NT seq
5250 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaatagaagagaggtacctctttatggacaggtggaggccattgtaaggtta
caggccagcgctcctgaagatgcagagttttatgttgttgtacaaggctcaaggcttaca
catgtgactgcagcaaaaaggagagatgatgggctaaccctttgcttcacagttcctggc
catgaccttgtggaagccgtctccgtgtcattctacttttacgcagaggaccaagtcaag
ccatgcgagggtgaagcgtctcttgaatacctcagggacgttgcccaggaggcagcagag
tatctgagtgcacacagggaccacctcggccccgagagctacctagacgtcctgaagagg
ttttcgatatgggcgcaggcagctgatgaggagctttccgctggagggttagaccgtgat
gatgaggatgtgcgactcagagaaagtagaggcgatgaagctggtctcaggcacctggat
gagaagatcacacaggctatggccaacatggattaccctcagcagtggaaaaacactgac
aggcagccaagggaagctgctgagcttcagcccaaagaaacactgcttcacctggcggtg
cgtttgggtttggtccatctttcccgtttcttaattcaccaaccgagaggtcaaagggca
ttgaccttacgcaatcaggagggagagacacccctccagctggctcagaaggatggacaa
cataccatgttcagggtgctggcagctcctccaggtcctgtggtcggccccgccccgggt
gtgtgtagtgtgtggtccgacagctcctgcgcgctgaggttttgtccggggacaaactct
ctgaccctgactgtgcggcatgctcccggcagctgccctcaggacggcatcatggtccta
cgagacaggctgctagaccacagcatcctcgaactgatcaatatgctcagagccgatact
gaggtagacaagagaagcaaacatgaagtcctttctaatgatgaaggcgttagcaaggag
ctccgagtggaagagcacgtgctggtggacaacgtttttgaagaacagcttgttctgtct
ttggatgacgacgatgatgaagaagagtactcatcctcatcatccgtaaatgggcatccc
atgaagtccagtgcagtccagagtcagttcacccagcatgctacagaccctctgctgtcc
atgatcaacagcaacgatcagaccatcacacaccagacacaggcggttgatgttgacctc
aagtacagcgtcagtgcagtgacgagggacagcacaggcacagacagcgggttatgggac
tcgcaagatctcctgctagccaccgacactcctccaccctattcagaaaacttccacccc
cactctgtgccctgctctctccctctctcacccgctgaccaggccctcgccaggccgaat
cccatctcctttgagccgaccaatgagagagacagtccgcccatggacacctgcgacctc
agtcccagtctggtggctctggaagtggacagtgaagaggacagcaccgagctaaagtct
ccgctttccccgctctcgtcacctgttgagaaaagtgaagacaaaagggatgcctttcgt
ccctcgcctgaccttacttgcactcacagccagtctgcctcctcgccgagtgaacctacc
acgaaggaattgggtgaccaggggattcgactgcgttcctattcctactcctccccaaaa
atcactttgcgaccagcacgttttgcccgggataatcacacttcagatatcagccctgat
gccgtgctccacagtgtcagccacagccgatctctccttcaggccctctctctgtctaaa
tctctgtctctgctccaccctggtaagcaaagagcctccagtatttcagagcagtcacat
gagaaaagaattgaagaagaggagttagacaagtacaatatcccaaccaaggtggagtca
gagaagtacaaggtcatccgtaccttcagttttctcaagagcaggatgtccagtacacgc
aacaagaccaaggcgaaggggaaggacagagaagccaaggataggcagctgaatggacat
cggttcgcgacgggggcctgcttgggccccaccgtgtgtgtggtatgtgacaaaccagca
tctggaaaggacctactgcattgctccagctgcactgccatcgtccataagggctgtaag
gaatctgttcccccatgtttgaagaaacttcaggataaatatgctgttaccatggtgaag
aacaggacagcatccctcccacagaatttcacagtgagagacagtcctcctcaatgtgtg
atccccatctctacctctctacctgtcatgaccccgaaggagaagaaggacaccgtgaca
cagtcatgctccctctctggaagtttccccaacagtgacagtcggctcagtgagagttca
gagacagagtctgatgccgtgagggtgaccagccagtcagaagagctgctgccgactcca
atgtcctccacctccacggactcatcctttggagaagactgtgtggatgggtacatccaa
agcgacatcttggctgatgctgtggattacgaggcggagacgtggagtctcgcagtagag
cacaagttctgcaagcggcaggacaaacgagctgtcaagaggcaggatgttatctatgag
ctgatgcagactgagattcaccacctacagacgctgcacatcatggcggaggttttccgg
cgaggcatgagggaggaagtgcagctagatacggaagcggtgaagcgggtcttcccctgt
ctggaccagctgattctcttccaccacaccttcttcgctgccatgagggagaggcgtcac
agctcagcccagccccagggacacaggaactacctcatccagcgcgtaggagacgtcctg
ctccaacagttttccgatgagaatggggagaaaatgaagcaggtttatggagaattctgc
agccgtcacaacgaggcggtcagctttttcaaggagctccagcaaaataacaagagattt
cagatcttcattaagcaacaaggtaataattctttggtgcgacggagggagatcccggag
tgcatcttgctggtaacccaaaggattacaaagtacccagtgctgctggagaggatcctt
caatatactcaagaagacacagaggagcatgccggcctttccaaagccctggccaagatc
cgagaggtgatagcagccgtggacttgagggtcagcgaatacgagcggcatcagagatta
caagaagtgtggagccgcatggagaatcgcagctcggccaagctgaagaacggacacact
ttccgcaaacaggacatgatggggccgggacaaacgctcaaacaccagggcctgctcctg
tggaagactgccaccggtcgactgaaagatgtcctggcgctccttctcacagacacagtc
atcttcctacaagaaaaagaccagaagtacacgtttgccactgtggaccagaaacctcca
gtcatcgcactgcagaagttaatagtgcgagaagtagcaaatgaagagagagggatgttt
ttgatcagtgcatcagccgccgggcccgaaatgtacgaggtccacacgtcatccaaagaa
gaacgaaacacttggatgaggctcattagagaggctgtagagagctgtccggaggaagag
gaggaatacacgagtgaatccgaagaggagaagcgagctgctgaggctcgtattcagaag
atcaacaagttacaagagagtctgctgagccaggaccagcagatctgctccagcctggag
gacaagctacagatttacacagagctctccgctctgagtgggaggacggacgcttcggca
gtcgaaccgcgactgctcgtccagccgcactcagaggagctgccccagcctgccgtgctg
ctggctgcggctctgcaagaggctgaaaaccttaaaaccacgttgtcctccaaggcccgt
cctgcatccagtcacagcccagactctgacacagactatgagtttcccgtcagccctgct
acacttgtagagctcccctcaggttcttccgagccctcaattgaaaaccccgaggccagt
gaggggagttggactgaggcccctgttcttcagtccccagctcagttgcaaaaaacgaac
agagacgacattgactccaaggttgctcaaagtgtacaaagcctgacccagttactctac
agtctgcaggctgcggtgaccatccaggacagctgctacgaggttcagaggctgctcctc
cgagagaccgggcgccgttctccccacgcccagcgaccctacctcccaagcattcggggc
aacaccctacaagaacaggagaagcagcgtaacctggagaagcagaaggaggaggtggtg
gcggctcagcggctccaggaccgactgcggcaggagaaggagcgctgggagagggattgc
caggcgagggagagccagcagggggagcaggagagcaggctggaggagagggagaagcag
tgccacctggaggcggagaggctgaggcgcgagagggaagagctggacgagcagctggag
gagtaccagcagagcctggagcggctcagggagggccagaggagtgtggagagggagcgt
gagcgcctggagaaccagcaaaagctgctccagacctggaggcacagccggcagaggagc
ctgcccgctgtgattcctcacatggtcatacctctagatgggcagcaggactcggtggca
ggtcagccccgagaccacgctggtaacggctccatgtttgtgaatgaggctgcgttcgtc
agcaccagcatcaacaaccgccacgtccaccacaaaagaaacgaccccagtgcacacaac
tgtctcaacaccctgctggccagatccaacagcagacagccccctatagctaaggctcct
cataatccacactctgcctcccagggatgggtgatggggagagggtacctctacagccct
gccggaaggctgggactgcagcgaattcccgatgatcataacagtcacagctacatcggg
gagacctggtcatcaacagcgagcggatctgatccgtatccggagctcccgcatcccagt
gaccatcagctggacctcagtgcactggtttccttggagactgacagcggtggggaggag
ggaagggaggaaaccattgtgtacctctga
DBGET
integrated database retrieval system
