Xiphias gladius (swordfish): 120806383
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Entry
120806383 CDS
T07311
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120806383 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120806383 (myo5b)
04131 Membrane trafficking [BR:
xgl04131
]
120806383 (myo5b)
03029 Mitochondrial biogenesis [BR:
xgl03029
]
120806383 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xgl04812
]
120806383 (myo5b)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120806383 (myo5b)
mRNA cycle factors
P-body specific factors
120806383 (myo5b)
Membrane trafficking [BR:
xgl04131
]
Others
Actin-binding proteins
Myosins
120806383 (myo5b)
Mitochondrial biogenesis [BR:
xgl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120806383 (myo5b)
Cytoskeleton proteins [BR:
xgl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120806383 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
Ac76
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120806383
NCBI-ProteinID:
XP_040013441
LinkDB
All DBs
Position
LG20:25235347..25276164
Genome browser
AA seq
1819 aa
AA seq
DB search
MSVYELYTKFTRVWIPDPEDVWKAAEIIRDFKEGESLLHLKLEDETPLEYPVGPKSNPLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNNIYTYCGIVLVAINPYEQLQIYG
EEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSSTETNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASASLPELRDLSLTSAEDFTYTSLGENIFIEGVN
DAEDFKKTREAFTLLGIKDSSQSNIFKIMASILHLGNVAICPERDGESCHISRDDLHLKH
FCRLLGLELQQMEHWLCHRKLVTASETYVKTMSSKQAANARDALAKHIYARMFDWIVEHI
NMALQTSSKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEARLGVLDLLDEECKVPKGTDQNWAQKLYKQHSSSAHFQK
PRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFHEKDDAPP
SKTSRVNVRAAKSTPKAPNKEHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDYKEA
FSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMQKSDMMSADKKLVCK
NLLEILIKEPDMFQFGRTKIFFRAGQVAYLEKLRADKFRAACIKIQKTVRGWLQRVRYRK
IRKSAVTLQRYGRGYLARRYAEYLRLTRAALLCQKQYRMVRVRRAYLRVRQAVVTIQAYT
RGMFTRRIYWEFLLHHKAMIIQKSVRSWLQRKKFRRARNAAVVIQCAYRRMRAKRQLKQL
KIEARSAEHLKKLNTGMENKIVQLQRKMDDQSKEYKAHNEQLLMANSSLGSEVNKLQKEL
EQIRGQQGEGGQLTSLQDELERLREELQEAYAERKRLEEEHSTEKLGLKQRVKELERENS
LLKSEKEEMNQRILQQSKSAAEDSSVSQREGTLQTELDGERQRYQNLLREFSRLEQRCDN
LKEELSLTKFHPGHRRNPSNQSSLESDSNYPSVSTSEVGDTEDSVQLVEEMGVERAAMDI
SLFMKLQKRVRELEQERKRLQISVDKMEELARRRGAEAKSPTSEQETADLAYNSLKRQEL
ESENKKLKNDLNELRKTIAERASQNSSSNELQDSYNLLISQLKAANEELDARKEEVLILR
TQIVSTAQLQEKNEHIQESKKIPELNNSKEPVDKEEALEAYHGLCESKRLLEAQLQSQSR
QHKDELEALNTQIELLKADIEKKQEILNHTMSLSPEAQVEYSVQQEITRLTNDNLDLKEL
VEKLEKNERKLKKQLRIYMKKVQELEASQAAGLTSRSKPELSRQVTVQRKEKDFEGMLEY
YKDDEALLVKTLITDFKPNTVTATVPCLPAYILFMCIRHADYINDDQKVESLLTSTINGI
KKVLKKNNDDFEVTSFWLANSSRLLHCLKQYSGDEVFMTQNTAKQNEHCLKNFDLAEYRQ
VLSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSLAGVKPMGYRNRSSSMDTDGGGP
SSYTLEALIRQLGQFHGIMRDQGLDPEIVGQVVRQLFHCVNAVTLNNLLLRKDVCSWSNG
MQLRYNTSQMEEWLRGNNLYQSKAAATLEPIIQAAQLLQVKKKTSQDAEAICSLCTALNT
QQIVKILNLYTPLNEFEERVTVSFIRNIQNRLQERNDPPQLLVDTKHTFPVLFPYTPSAL
SLETLHIPASLGLDFLIRV
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtacgagctgtacacgaagttcactcgggtctggatcccggatcctgaggat
gtgtggaaggctgcggagatcatcagagatttcaaagaaggagagtcgcttcttcacctc
aaactggaggatgagacgcctctggagtatcccgtcggtccgaagagtaaccctcttccc
ttcctccgtaaccccgacatcctggtgggggagaatgacctcactgctctcagttacctg
cacgaacctgcagtcctgcacaacctcaaagtccgcttcctggagtccaacaacatctac
acatactgcgggatcgtactggtggccatcaacccgtacgagcagctgcagatttacgga
gaggaggtcatcaacgcctacagcgggcagaacatgggcgacatggaccctcatatattt
gctgtcgctgaagaagcttacaagcagatggccagagatgagaggaatcagtccatcatc
gtgagcggagaatcgggagcaggaaagacggtttctgcaaagtacgccatgcgtttcttt
gccacggtgggaggttcatctaccgagactaatgtggaggagaaagtcctggcctccagt
cccatcatggaggctataggaaacgcaaaaaccacacgaaatgacaacagcagtcgcttt
ggaaagtacattcagatcggtttcagccgccactaccacatcatcggagccaacatgcgg
acgtacctgctggagaagtcccgggttgtttttcaggctgaagatgagagaaattatcac
atcttctatcagctctgtgcctctgccagtttaccagagctcagggacctcagcctcacc
agtgcagaagacttcacctacacatctttaggggagaacatcttcatcgagggcgtgaac
gatgctgaggacttcaaaaagaccagagaggccttcacactgctgggaataaaggacagc
agccagagcaacattttcaaaataatggcctccattcttcatctggggaacgtagcgatc
tgcccagagagagacggagagtcctgtcacatctcaagggacgacctccacctgaagcac
ttctgcagactgctgggcctggagctgcagcagatggagcactggctctgtcacaggaag
ttggtcactgcctcagagacgtatgtgaagactatgtccagcaaacaggcggccaacgcc
cgggacgctctcgccaaacacatctacgcacgcatgtttgactggatcgtggagcacatt
aacatggccctgcagacgtcctccaaacagcactccttcatcggggtcctggacatctac
gggtttgagacgttcgaggtgaacagttttgagcagttctgcatcaactacgccaacgag
aaacttcagcagcagttcaactcgcatgtgtttaagttggagcaggaggagtacatgaag
gagcagatcccctggactctgatagacttctatgacaatcagccctgtatcgacctgatc
gaggctcgactcggcgtcctggacctgctggatgaagagtgtaaagtgccgaagggaacg
gatcagaactgggcccagaagctctacaaacagcactccagcagcgctcacttccagaaa
cctcggatgtccaacacctccttcatcatcatacacttcgctgataaggtggaatatcag
tgcgaagggtttctggagaagaacagagacacggtctacgaggagcagatcaacatcctg
aaggccagtcagtttcagctcgtagcagatctgtttcacgagaaagacgacgcgcccccc
tcgaagacatccagagtgaacgtccgagcagcaaagtcgactcccaaagctcccaacaaa
gagcacaggaagactgtggggcaccagttccgcagttccctccatcttctcatggagact
ctgaacgccacaactcctcactacgttcgctgcatcaaacccaacgactacaaggaggcc
ttctcgttcgactcgaggcgagccgtgcagcagctcagagcctgcggggttctggagacg
atccggatcagtgcagccggatacccatccaggtggacgtacccagacttcttcagcagg
tatcgagtattgatgcagaaatccgacatgatgtcggcagacaagaagctggtgtgtaag
aacctgctggagattctgattaaggagccggacatgttccagtttggtcggactaagatc
ttcttccgagcggggcaggtagcgtacctggagaagctgcgggctgataagttccgcgcg
gcctgcatcaagatccagaagacggtgcgaggctggctgcagagagttcggtaccgcaag
atccgcaagtctgccgtcaccctgcagagatatggccgaggatacctggcccgcagatac
gccgagtacctgcgtctgactcgagcggcgctcctctgtcagaaacagtatcgtatggtg
agagtgagacgggcctatctgagagtgagacaggctgtcgtcaccatccaggcctacacc
agggggatgttcacccgcaggatttactgggagttcctcctgcaccacaaggccatgatc
atccagaagagcgtccgcagctggctgcagaggaagaagttcagacgggcgcgtaacgcc
gccgtcgtcatccagtgtgcgtacagacgcatgcgcgctaaacgacaactcaagcagctg
aagatcgaagcgcggtccgccgaacatctgaagaaactcaacacgggcatggagaacaag
atcgtccagctgcagaggaagatggacgatcagtccaaagagtacaaagctcacaatgag
cagctgctgatggcgaattccagtctcggctcagaggtgaacaaactgcagaaggagctg
gagcagatccggggtcagcagggagagggaggtcagctgacgtcactgcaggacgagctg
gagaggctgagggaggagctgcaggaggcgtacgcagagaggaagaggctggaggaggag
cacagcaccgagaaactgggcctcaaacagagggtgaaggagctggagagagaaaactct
ctgctgaagagtgagaaggaagaaatgaaccaaaggattcttcagcaatcaaagagcgcc
gcagaggacagcagtgtgtcccagagggaagggactctgcagaccgagctggacggagag
aggcagcgataccagaatctgctcagagagttctccagactggagcagcgatgcgacaac
ctgaaggaggagctgtctctgaccaagttccaccccggccaccgcaggaacccgtccaat
cagagcagcctggagtcggactccaactacccgtccgtctccacctcagaggtcggagac
accgaggactccgttcagctggtggaggagatgggggtggagagggctgcgatggacatc
agtctgttcatgaagctgcagaaacgggtcagagagctggagcaggagcggaagagactg
cagatcagcgtggacaagatggaggagctcgccaggcgcaggggcgcggaggcgaagagt
cccacctctgagcaggaaactgcagatctggcctacaacagcctcaagagacaggagctg
gaatcagagaacaagaaactgaagaatgacctgaacgagctgaggaagaccatcgctgag
cgcgcgtctcaaaacagctcgtccaatgagctgcaggacagctacaacctgctgatcagt
cagctgaaagcagccaatgaggagctggacgcccgcaaggaggaggtcctgatcctcagg
acccagatagtcagcaccgcccagctacaggagaagaacgaacacatacaggagagcaag
aaaattcctgagctgaacaacagcaaagaaccggtggacaaagaggaggctctcgaagcc
tatcacggcctgtgtgagtccaaaaggctgctagaggcccagctgcagtctcagtccagg
cagcacaaagatgaactggaagctcttaacactcagatcgagctgctgaaggctgacatc
gagaagaagcaggagatactcaaccacaccatgtctctgtctcctgaggctcaggtggag
tacagcgtccagcaggagatcacacggctcaccaacgacaacctggacctcaaggagctg
gtggagaaactggagaagaatgagaggaagctgaagaagcagctcaggatctacatgaag
aaagtccaggagttagaagcctctcaggctgcaggtctgaccagcaggtccaaacccgaa
ctgagtcgccaggtgaccgtccagaggaaagagaaagactttgaggggatgttggaatac
tacaaggacgatgaagccctgctggtcaagactctgatcactgacttcaagcccaacacg
gtgacggccactgtcccctgcctgccagcatatattctcttcatgtgcatccgccacgcc
gactacatcaacgacgaccagaaggtggagtctctgctcacctccaccatcaacggcatc
aagaaggtgctcaagaagaacaacgatgacttcgaggtgacgtccttctggctggccaac
tccagccgcctgcttcactgtctgaagcagtacagcggagacgaggtgtttatgactcag
aacacagccaaacagaacgaacactgtctgaagaacttcgacctggcagagtacagacag
gtgctgagtgacctctccatccagatctaccagcagctcattaaagtggcagaaggcatc
atacagcccatgatcgtgtcagccatgttggagagcgagagcatccccagcctggcgggc
gtgaagccgatgggctacaggaaccgttcgtccagcatggacaccgacggcggcggcccc
agcagctacactctggaggccctgatcagacagctgggacagtttcacggcatcatgagg
gaccaaggtctggaccctgagatcgtgggtcaggtggtccgacagctcttccactgcgtc
aacgccgtcaccctcaacaacctgctgctgcgcaaagacgtctgctcctggagcaacggc
atgcagctcaggtacaacaccagtcagatggaggagtggctgagaggaaacaacttgtat
cagagtaaagctgccgccaccctggagccgatcattcaggccgcccagctgctgcaggtc
aagaagaagacgtctcaggacgccgaggccatctgctcgctctgcaccgccctcaacacg
caacagattgtgaaaatcctgaacctctacacgccgctgaacgagtttgaggagagagtc
accgtgtccttcatcagaaacattcagaatcgtcttcaggagagaaacgatcctcctcag
cttctggtggacaccaagcacaccttccccgtcctcttcccgtacaccccctccgccctc
agcctggagacgctgcacatccccgcctccctcggcctggacttcctcatcagagtctga
DBGET
integrated database retrieval system
