Xiphias gladius (swordfish): 120806452
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Entry
120806452 CDS
T07311
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04020
Calcium signaling pathway
xgl04080
Neuroactive ligand-receptor interaction
xgl04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120806452 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120806452 (grin1a)
04082 Neuroactive ligand signaling
120806452 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xgl04040
]
120806452 (grin1a)
Ion channels [BR:
xgl04040
]
Ligand-gated channels
Glutamate (ionotropic)
120806452 (grin1a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
120806452
NCBI-ProteinID:
XP_040013586
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Position
LG20
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AA seq
938 aa
AA seq
DB search
MRLFLLAVLFSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKTRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTLPDGTCKEEMTLNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TTLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcttctcgtgctcctgcgcgcgggccggctgcgag
ccgaagatcgtgaacatcggggccgtcctgagccagaagagatacgagcaggtcttcaaa
gacgccgtgacccaggccaaccaggtctacggcagggacaaattcaagctgaccgccatc
tccgtaacgcataaacccaacgccatccagatggctctgtccgtctgcgaggacctcatc
tccagtcaggtctacgctatcctggtgagtcaccctccccagtccaatgaccacctcact
ccgacgcccgtctcctacactgcaggcttctaccgcatccccgtggtggggctcaccacc
cgcatgtccatctactcggacaagagtatccacctgtcctttctgcggacagtgcctccc
tactcccaccaggcgcatgtgtggttcgacctgatgcgcgagttcaactggaaccacatc
atcctgatagtaagcgacgaccacgaggggcgggctgctcaaaagaggctcgagaccctc
ttggaggagagagaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggcgaaagagctggaggcccgagtcatcattctgtccgcc
agtgaggaagacgctgccgcagtgtacaaggctgcccgcttcctcaacatgacaggctcg
ggctacgtgtggctggtgggcgagagggagatgtcgggtaaagccctgagcgaggcgcca
gacggtctgatcggcctccagctcatcaacgggaagaatgagtcagcccatatcaatgat
gcagtggctgtggtggctcagtccatccaggagctctttgagaaggaaaatatcacagaa
cccccgagaggatgtgtgggcaacaccaacatttggaaaacggggcccctttttaaaagg
gtgctgatgtcgtctaaatacccagagggcctcacagggcgcgtggaattcaatgacgac
ggcgacaggaagtacgcccactacagtatactcaactaccagaagactcgactcattcaa
gttggcatatacaatggaacacaggtggtgatgaacaatcagcggaagatcatctggccc
ggaggagagaccgagaaaccacagggcttccagatgtccactcgattgaagatagtgacg
atacaccaggagccatttgtgtatgtgaaacccactctgcctgatggaacatgcaaggag
gaaatgacattaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggtcgcccaattgtaccccagtgttgttatggattctgtattgatctcctgatc
aagctggctatgaccatgaactttacctatgaggtgcatctggtggctgatgggaaattc
ggaactcaggagcgggtgaacaacagcaacaagaaggagtggaatggcatgatgggagag
ctcctggggggcctggctgacatgattgtagcaccgctgactataaacaacgaacgagcc
cagtatatcgagttctccaaaccctttaaatatcaaggcctcaccatcctcgttaaaaag
gaaattcctcgcagtacactggactcgttcatgcagccattccaaagtacactgtggctg
ctggtgggtctatcggtgcatgtggtggcggtgatgctttacctactagaccggttcagc
ccatttggaagatttaaagtaaacagtgaagaagaagaagaagatgccctcaccttatca
tctgctatgtggttctcctggggagtgttgctgaactctggaataggagaaggtgcacca
cgcagcttctcagcgagaatcctgggtatggtgtgggccggctttgctatgatcattgtg
gcttcttatactgccaatctggctgccttcctggtgttggaccggcctgaggagcgcatc
accggcatcaatgacccgaggctgagaaacccatcagacaagttcatctacgccacggtg
aagcagagctccgtggacatctacttccggcggcaggtggagcttagcaccatgtaccgc
cacatggagaagcacaactatgagagtgccgccgaggctatccaggccgtgcgcgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaacggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcaaggagcaatgcc
ccagccacactcacctttgaaaacatggcaggggtcttcatgctcgtggctggaggtata
gcagcagggatcttcctcatcttcatcgaaatcgcctacaagcgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaatgtttggaggaagaacctgcaggat
aggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatcagt
accaccctggcctccagcatcaagagacgtaggtcctccaaagatacgcagtacccaccc
actgacatcacgggccaactcaacttgtcggacccgtctgtcagcactgtggtgtaa
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