Xiphias gladius (swordfish): 120806460
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Entry
120806460 CDS
T07311
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03272
Virion - Hepatitis viruses
xgl04145
Phagocytosis
xgl04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120806460 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
120806460 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
120806460 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120806460 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120806460 (scarb1)
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Phagocytosis
Scavenger receptors
120806460 (scarb1)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120806460 (scarb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
120806460
NCBI-ProteinID:
XP_040013606
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All DBs
Position
LG20
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AA seq
506 aa
AA seq
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MAISRSKAAVAFVVAGVLAVVFGTVLSFVGPIVIDDQIVKNTVIDPKNDLSYTMWRDIPV
PFFMSVYFFHILNPKEILQGEKPMVEQRGPYVYRKRCQKDNITFHHNDTVSYREYRRYYF
EPSMSVGNESDVVTIPNMLVLGAAVMMENLPFAVRLMISATFKTFNEGPFLTKTVGELMW
GYDSKLVDFLNKYLPGMLPATGKFGLFAEFNNSNTGLFTIFTGQDDIRKVHKVDSWNGLT
ELSYWRTPQCNMINGTAGQMWPPFMTKESTLPFYSPDACRSMELVYQRPGEFKGIPLYRY
VAPETLFANGTEYAPNEGFCPCRQSGLLNVSSCRHNSPVFISHPHFFNADPVLLDYVEGL
RPNEEEHGLFIDIHPQTGVPLNVAIRLQLNLYMKRVSGITETGKISEVVMPMIWFEESGY
IDGPVLNTFHTNLVVLPAVMEYMQYGFIALGLATIIVAALVHHKVKMEKGAGAAALQMHW
LTFTLQAAQLISPIHYGSYLVGEGRC
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggccatcagtagatccaaagcggcggttgcgttcgtggtggcaggtgtcctggccgtg
gttttcgggacggtgctttctttcgtgggaccgatagtcatcgacgaccagatagtgaag
aacacggtgatcgacccaaagaacgatctgtcctacaccatgtggagggacatcccagtg
cccttcttcatgtcggtctacttcttccacatcctcaaccccaaggagatactgcaggga
gagaagcccatggtggagcagcgaggaccctatgtgtacagaaaacgctgtcagaaagac
aacatcacctttcatcacaacgatacggtgtcgtacagggagtacagaagatactacttc
gagccttccatgtctgtggggaacgagtctgacgtcgtcacgattccaaacatgttggtg
ctgggcgcagcggtgatgatggaaaacctgccgttcgcggtgcgtttgatgatcagcgcc
accttcaagacgttcaacgaggggccctttctgaccaagacggtgggggagctgatgtgg
ggttatgacagcaaactggtcgatttcctcaataagtacctgcccggcatgctgcccgca
acgggaaagtttggcctttttgctgaattcaacaactccaacactggtctgttcaccatc
ttcaccggacaagacgacatcaggaaagttcataaagttgattcctggaacggcctgacg
gagctgagctactggaggactcctcagtgtaacatgatcaatggaacggctggccagatg
tggcctcccttcatgacgaaagagagcaccttgcctttctacagccctgacgcctgcaga
tctatggagctcgtttaccagcgtcctggtgagtttaagggtatccctctatatcgatat
gttgcacccgagaccctgttcgccaacgggacagagtacgcccccaatgaaggtttctgc
ccctgtagacagtccggcctgctgaatgtcagcagctgtcgccacaactctccagtcttc
atctctcatcctcacttctttaatgctgatcccgtgctcctggactatgtggagggcctc
cgtcccaatgaggaagagcatggcctcttcatagacatccacccgcaaacaggtgtcccc
ctgaacgtggccatccgtctgcaactcaatctttacatgaagagagtgtcaggaattaca
gagactggcaagatttcggaggtggtgatgcccatgatctggtttgaggagagcgggtat
atagacggccctgtcctcaacacgttccacacaaacctggttgttctgcctgctgtgatg
gagtacatgcagtacggcttcatagcactcggcctggcaacgataatagttgccgccctg
gtgcatcataaagtgaagatggaaaaaggagccggagcggctgcgctacagatgcactgg
ttgacgttcactctgcaagctgcacaacttatatctccgatacattacgggtcttatctg
gttggcgaaggacgctgttga
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