Xiphias gladius (swordfish): 120806557
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Entry
120806557 CDS
T07311
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xgl00535
]
120806557
04091 Lectins [BR:
xgl04091
]
120806557
Proteoglycans [BR:
xgl00535
]
Cell surface proteoglycans
Others
120806557
Lectins [BR:
xgl04091
]
C-Type lectins
Others
120806557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
120806557
NCBI-ProteinID:
XP_040013786
LinkDB
All DBs
Position
LG20:complement(9414862..9436738)
Genome browser
AA seq
2556 aa
AA seq
DB search
MGRFVADLFLLLLFSTGQVDGVSFYGDSYIHLRTVEVSIQTLLHVRFRTSSQAGLLFLAA
GHRDFLLLELISGRLQVRLDLGSGERSLRSEKGIHLSDLGWHSMELTHDRHNVTMTVDRN
SHTSLRMPGPDLELSVEDGLFVGRTAGLNHSYLFNISTGFRGCVDEVVFNEHNLLSSLRP
YSRYKSVHEVSLGCSLQFSATEEDPVSFFSSKAFISLPPWEVPQEGVFQCELHPSAREED
GMVMYSSGDQGEFVAIEIIDGHLVVTIGNGEGSKTELRSLTHVSSNHTWYPIQLHLLPNS
VQLKVDNELIKANLRLELQIIQLKGPLFLGGLDEKARGQAQRVGLISASSGGGGGSFRGC
LREIRVNTQRTGLPHAAITKDITVGCKTGPAPVTLTTISPTDHPEFDVTTSQPSSNNKKN
LNFLLLRKLEVTEGGRAALEPKHIKVNLDFPKLGIHPSQLKFLIEQQPVHGQLRLDLSPD
PYGILDEGQEKSITIGTEEKDRTFSMLDLWQGRVTYVHSGSEDQNDFFMFSAFSSDKKEL
PVFLKDNRLHRFDISISPVNDAPVLSLPEGNLFTLLEKSKRQMTTDVLRVSDPDSSPAEL
VFSSLGNLNTAAGHLEHQDYPGRAINMFSLHDLEEGKISFVHTGVSTSRLPLRVSDGQKS
SNTVVLRVMAVALEHKLVNNTGLEVNQGEASIITTNHLAVQVNVADQAVEIRYDITELPQ
YGELQRLHSSGGWKPTTSFSQKLLEKERIRYFSTYHGLQTQNNITDQFKCKININSLATE
EVVIPIVVRWIHFKVTRSKMEVNGSQLAVVTPEDLHVVSKGVKINESNLYIRLITVPKKG
QLFLDNKVLQKNSTFSQKNITDGFVKYKLLNRLHDDTKDTFSFQVFSTHANSTTCDFRIN
IKTESAAITFLNKGLSVLEGGSKVITKDILFTHTASKREVQYSITVSPMHGQIRKINLSN
STSINDNIVIFTNQDIVEERIMYVHDDSETKQDSFKFQIMVYKPHKHSSKKEDRNTAEHT
FNISVQLVNDQRPVRVVDKVFHVARDGQRLVTLNDLRYRDDDSDFEDNWLVYTRRGIPMG
ELVLANDPSHKLYEFTQRDLEQKKVLFVHRGVSFGRFVLFVSDGKHYVSTLLEVMAQDPY
LQVENNTGLMVQRGGITTLTSTNLSVFSNLDIRDPREVTFEVFLPPKHGVLCFNDGDHGT
VKEADAISIFNFWDLVAGRLAYHHDGSHELSDVFNVSARARVKSIERKPDRGRREVHLDI
GVLVKIYLESHQRPPTVICNLPVVVAEGQTVSISREHLEVVHEDSQPSEIIFTVLSPSTL
GFLQRFSPINKHQNNNREQQHLYQGIREQQTTSFTQDDLNHGSIIYHHQAIGSTNDSVLL
EATNGVTKVGPIRLEIDIIPILLPLQVSDLTLDEGSSLPLTSDIIKVANHHFSGMNFLYQ
VIVPPRHGHLEHSRIPGMPITAFTHTEVEREYISYIHDGSDTERDNFTIVANQTEIRKNS
LPCTVRISVTPVNDETPVVATNRGLKVWVGSVTEITIDDLSAEDSDTLSEGLEFVVTPPS
NGHLALKSAPSRHILNFTQNHIQNGQLVFVHSGALSGGFHFQVNDGVNFAPRQIFSTTAH
SLVLTLQRNHPMEVYPGSVTPISEQELQVLTNDVSDIRRNHSVVFAVTAPPKLGRLVQRM
PDNSTRNISTFTQSMVNDGVILYDQNKPESVGWSAADAFSFTVSSPPAFLPPHTFTILIS
YQANEHHDNPQHKTRLLNNAGAVVAEGGRVTIDRSKLDASNLLGNVPEPHRRDHHILYRV
ISLPRHGALSIPGHNLTRDQPDFSQITLNKIGITYIHDDSETTSDSFTFRAWVAPLDLSS
SSSSYFSPLYSAPSSSFSSIDTVSHRRVKDSLAVTETFNITVTPVNDQPPLIRSRAPSMK
VVVGERVVLGPDNLQVEDHDTPPEELHYLVISKPNNGYLTLGERPEPVTSFTQYDVNHGR
LHFIQQGEPSTGVFYFNVTDGYHRPLYKLFSLEVIKPSVSMVNNTGLSLVQGRTAVILTT
NRLAAQTNGRSKANITYTVTTHPRHGRIAINDQEVTIFCHEDLQFGRVVYHMTDLSESED
SFQISVSALSPGVDYGNVTAQTVKVTVRPLVYLREPVRVPSGIAVKLGKAMIDASELARI
SRADPVFAVLSPPKHGKLVKMTYDPNQASEVLKSFTFRDVVQGRVAIEETLSDSDNQLHD
NKSVLTTTRGHTPARPLNDSFTFLVKAGNVQPAKGELHFTILPHHQMHHHGPSGLNKADG
ASREHTTTHLPTHNRTTTVGGRGGGRGGSTTHGGVEVGLHPHISSNKNHNRAQHKLRPHS
RWGNDTRSGSHGGRSGSGAEGAGGGHNPPPQPHNPSVSDKQGPVNPPDTHLVHAEVFPRP
ASDPLLIILPLLACLLLIIILMVLILVFRHRKEKQARLRLMQELARLPLPTESSPYLGRP
ERSVTVPSVVVTPLGPASCPNSPKVAINPRRRSLAPGMTFWGPFEADGAGGDGNIRSGHS
NERHCGNAVRVVTAGFKTSVRSRSQTLTLKDNQYWV
NT seq
7671 nt
NT seq
+upstream
nt +downstream
nt
atggggaggtttgtggctgatctatttctgctactgctgttttccacaggacaagttgac
ggagtgtcgttctacggtgatagctacatccacctgcggacggtggaggtatccattcag
accttgctccatgtccgatttcgaacctccagtcaagcagggttgctgtttttggcagca
ggacacagagacttcttgctgctggagctgatctctgggcgtctgcaggtacgtctggac
ctgggctcaggtgagcgttcactacgctcagaaaagggcatccatcttagtgaccttggg
tggcactctatggagctgacccatgaccgccataatgtcaccatgaccgtagaccgaaat
tctcacaccagcctccgaatgccaggaccagatctggaactcagcgtggaggacggactc
tttgttggcagaacagctggtcttaaccactcctatcttttcaacatctccaccgggttt
agaggttgtgtggatgaagttgtgttcaatgaacataacctgctgtccagcctaagaccg
tattctaggtacaagagcgtccatgaagtgtctctgggctgtagtctgcagttttctgcg
acagaagaagatcctgtcagttttttcagctccaaagccttcatctcactcccaccatgg
gaggtgccgcaggagggagtgtttcaatgtgaacttcacccctctgcaagagaagaagat
ggtatggtcatgtacagctctggcgaccagggagagtttgttgccatagagatcatagat
ggtcacctggtggtgacaataggaaatggagaggggagtaaaactgagctgcgttctcta
acacatgtctctagcaaccacacctggtaccccatccagctgcacctgctacccaacagc
gtccaactgaaggtagacaacgagttaatcaaggccaacctgaggctggagctccaaatc
atccagctcaaagggccgctcttcctgggagggctagatgaaaaagctcggggacaggcg
cagcgagttgggctgatttctgcctcatctggaggaggaggaggctcctttagaggctgc
ctccgagaaattagggtgaacactcaaagaacaggtctccctcatgctgccatcaccaag
gacatcactgtgggttgtaagacagggccagctcctgtgacgctgaccaccatcagcccg
acagaccatcctgagtttgatgttacaacctcacaaccaagtagcaacaataagaagaac
cttaactttttgttgctgagaaagctagaggtcacagagggaggccgggcagccctggag
cccaaacacataaaggttaatcttgattttcctaaattaggcatccatccttcccagttg
aagttcctcattgaacagcaacctgttcacggccagctccggttggacctcagtccagac
ccttatgggatcctggatgagggtcaagagaaaagtattacaataggaactgaggagaag
gaccggactttcagtatgctcgacctatggcagggccgggtgacatacgttcacagtggg
tcagaggaccagaatgacttcttcatgttttcagccttctccagcgataagaaggagctt
cctgtgtttctgaaggacaaccgtctacacaggtttgatatcagcatcagtcctgtaaat
gatgcccctgtgctcagcctcccagagggaaacctttttactctgctggagaagtccaaa
cgacagatgacaacagatgtgctgagagtgtccgaccctgacagcagtcctgcagagctg
gtgttcagctcccttggaaacctcaacactgcggctggacaccttgagcaccaggattac
cctggcagggccattaacatgttctccctacacgatctggaggagggcaagatcagcttt
gtacacacgggagtctccacctccaggctgccactcagggttagcgacgggcagaagtca
agcaacacagtagttttgcgggtcatggcagtggcgctcgaacacaaactggtgaataac
acaggattggaggtgaaccaaggtgaagcttccatcatcaccaccaatcatctcgcagta
caagtaaatgtggctgatcaggctgtggaaatccgatatgacataacagagttgccacaa
tatggtgagctccagcggttgcactcaagtggcggctggaaaccaacaacctcgttttct
cagaaacttctagaaaaagagaggatcagatacttcagcacttaccatggccttcagact
cagaacaacatcactgatcagttcaaatgtaaaataaacatcaattcccttgccactgag
gaggttgttatccccatcgtggtacgctggatccacttcaaggtcacacgaagcaagatg
gaggtcaacggtagtcagttggctgttgtcactcccgaggacctccatgtagtttcaaag
ggagtcaaaattaatgagagcaacctctacatcaggctcattacagtgccaaagaaaggt
cagctattcctcgacaacaaagttctgcaaaagaactcaactttcagccagaagaacatc
acagatggtttcgtgaagtacaaactgctcaacaggctacatgatgacacaaaagacact
ttcagctttcaggtcttttcgacacacgccaactctacaacttgcgacttcagaatcaac
atcaaaactgagtcagcagccatcacttttttaaacaaaggcctttcagtactggaagga
gggagtaaagtcattaccaaagacatcctgtttactcacacggcaagtaagcgggaggtc
cagtacagcataacggtgagccccatgcatgggcagataagaaagatcaatctctccaac
tcaacgtccattaatgacaatattgtaatctttacaaatcaggatatagtggaggagagg
atcatgtatgttcatgatgacagcgagaccaagcaggattcttttaaatttcaaatcatg
gtttataaaccgcataaacacagcagcaagaaggaggatagaaacacagccgaacacacc
tttaatatctctgtgcagctcgtcaatgatcagagacctgtcagggtcgttgataaagtt
ttccatgttgcccgcgatggccagaggttggtgacgttgaatgaccttcgctaccgggat
gatgattctgactttgaggacaactggttggtgtacacacggagggggattcccatggga
gagctggtgcttgccaatgatcccagtcacaagctgtatgagttcacacagcgggacctc
gagcagaaaaaggtgttgtttgtccacagaggagtgagttttgggcgttttgttcttttt
gtatcagatgggaaacattatgtttccacactgctggaggtgatggcccaggatccttac
ctgcaggtggagaacaacacaggcctcatggtccagcgaggtgggatcacgaccctgacc
tctactaatctcagcgtcttcagcaaccttgacatccgagaccctcgtgaagtgacattc
gaggtcttccttccacctaaacacggagtcctctgctttaatgatggagatcatggcact
gtaaaagaagcagatgcaatttcaatattcaacttttgggatctggtggcagggcgcctg
gcgtatcaccacgatggcagccatgaattgtcggatgtgttcaatgtgtcggcaagagcg
agggtgaagagcatagagaggaaaccggacagagggaggagggaggtgcatctggacatc
ggagtgttggtaaaaatctacctggagagtcatcagaggccaccaacggtcatatgcaac
cttccagtggtggtggcggagggacagactgtctccataagcagggaacatttagaggtg
gtccatgaggacagtcagccctcagagataattttcacggtcctgagtccttccaccctg
ggctttcttcagaggttctcccccatcaacaagcaccagaacaacaatagagagcagcag
cacctctatcagggcatcagagagcagcagacaacctccttcactcaggatgacctgaac
catggatcaatcatctaccatcatcaggccataggaagcaccaacgactctgttctgttg
gaggcaaccaatggtgtcacaaaggtcggacctatcaggctggagatcgatatcattcct
attctgctccctctacaggtgtctgacttgacccttgatgaggggtcatccctgccactg
acctctgacatcatcaaggtcgccaatcatcacttctcaggaatgaacttcctgtatcaa
gtcatcgttccaccgcgacacggacacttggagcacagccggataccggggatgcccatc
actgctttcacacacactgaggtggaacgtgagtacatctcctacatccacgatggcagc
gacacagagagagacaacttcaccatcgtggccaatcagacagaaatcaggaagaacagt
ttgccctgcaccgttcgcatcagtgtcacaccggtcaatgatgagactcctgtcgttgca
accaaccggggtctgaaggtgtgggtgggctcggtgacagaaatcaccatagatgatctt
agtgcagaggactctgacactctgtctgaggggctggagttcgttgtcacaccgccaagc
aacggccatctggctctgaagagtgccccctccagacacatcctgaacttcacccagaat
cacatacaaaatggacagctggtgtttgtgcacagtggtgcgttgtcgggtggcttccac
ttccaggtgaacgatggcgttaactttgcccctcgtcagatcttcagcacaactgcccac
tctctggtcctcactttgcagagaaaccatccaatggaggtctacccaggctctgtgaca
ccaatcagtgagcaggagcttcaggtgttaaccaacgacgtcagtgatatcagaagaaac
cactctgtggtgtttgcagtgactgctccccctaaacttggtcgcctggtccaacgtatg
cctgacaactccacacgaaacatttctacattcacacaaagcatggtgaatgatggagtc
atcctgtacgatcagaacaagccagagtcagtgggatggtcggctgcagacgctttctct
ttcaccgtgtcctctcctcctgctttccttcctccacacaccttcaccatcttaatctcc
taccaggccaacgaacaccatgacaaccctcaacacaagaccagactactgaacaatgca
ggtgctgtggtggcagagggaggcagggtcacgattgacaggtctaaacttgatgcctcc
aatctcctggggaacgttccagagccccaccggagagaccaccacatcctataccgtgtg
atttctctgccacgtcacggggctctgtctataccaggacataatctcaccagggaccaa
ccagatttctcacagatcaccctgaataagatcggcatcacatacatccacgacgactct
gagacgacgagcgacagcttcactttccgggcttgggtggctcctttggatctctcctcc
tcttcctcctcctacttttcccctctgtattcagccccatcatcctccttttcgtccata
gacacggtctctcatcggcgagtcaaggacagcctggcggtgacggagacgttcaacatc
acagtgacaccagtcaacgaccagccgccactcatcaggagcagagccccgagcatgaag
gtggtagttggagagagagtcgtacttggcccagacaatctgcaggttgaggatcatgac
acccctccagaggagctgcactacctagtgatcagtaaacccaacaacggctacctgacg
ctgggggagagaccagagccggtgacctctttcacccagtatgatgtcaaccacggccgg
ctgcactttatacagcagggtgagccctccacaggagttttctacttcaatgtaaccgac
ggttatcatcgtccactctacaaactgttcagtttggaggtgattaagccttctgtctcc
atggtgaacaacactggtctgtcattggttcaaggcaggaccgctgtgatcctgacgacc
aaccggctagcagctcagaccaacggtcgcagcaaggctaacatcacctacacggtcacc
acgcaccctcgccacggacgcattgctattaacgaccaggaggtcacgatcttctgccat
gaggacctgcagtttgggcgtgttgtctatcacatgactgatctcagtgaatcagaggac
agcttccaaatctctgtgtcagccttgtcgcctggggtagattatggaaatgtaactgca
cagacagtgaaggtaactgtgcggcctctagtctacctgagggagccggtcagagtaccc
agcggtatcgctgtgaaactcgggaaagccatgatcgatgcctctgagctggcaagaatc
agccgagccgacccggtctttgcggttctgtctccaccaaaacatggaaaactagtcaag
atgacctatgaccctaaccaagcatcagaggtcttgaagtcatttacgttcagagatgtg
gtgcaaggccgagtcgccattgaggagaccctcagtgacagcgacaaccagctccatgac
aacaaatcagtgctcacaacaactcgaggccacacccctgccagacctctcaatgattct
ttcaccttcctggtgaaggctggaaatgtccaaccagcgaagggtgagcttcacttcacc
atcttaccccatcaccagatgcatcatcatggtccgagtggtttaaataaagcagatggg
gcaagtcgcgaacatactacaacccatctgccgacacataataggactactactgtagga
ggaagaggaggtggacgagggggatccacaacacacggcggagttgaggtgggtttgcac
ccccacatttcgtcaaataaaaaccacaacagagcacagcacaagttgaggcctcacagc
cgctgggggaacgacacacgcagtgggagtcatggaggaagatcaggcagtggtgcagag
ggagccggagggggtcacaatcctcctccacaaccccacaatccttctgtctcagacaaa
cagggtcccgtgaaccctcctgacacccacctggttcatgccgaggtcttccctcgcccc
gcttctgatcccctcctcattatcctgccgctgctggcctgtttgctcctcatcattatt
ctcatggttttgattctggtgttccgccaccgcaaggagaaacaggcccgactgcggctc
atgcaagagctcgctagattgcccttacccactgagagcagtccttacctgggccggccg
gagcggagtgtgactgtgccctccgtggtggtcaccccgcttggccctgcaagctgccct
aactcaccgaaggtagccataaatcccaggaggaggagtctggcccctgggatgaccttc
tgggggccatttgaagcagatggagcaggtggcgatgggaacattagaagtggtcacagt
aatgaaagacattgtggtaatgctgtccgcgttgttactgcaggattcaagacctctgtg
agatctaggtcccagactctgactcttaaagacaaccaatactgggtttga
DBGET
integrated database retrieval system
