Xiphias gladius (swordfish): 120806567
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Entry
120806567 CDS
T07311
Symbol
si:ch211-241b2.5
Name
(RefSeq) uncharacterized protein si:ch211-241b2.5
KO
K06745
programmed cell death 1 ligand 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120806567 (si:ch211-241b2.5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
xgl04090
]
120806567 (si:ch211-241b2.5)
CD molecules [BR:
xgl04090
]
Proteins
120806567 (si:ch211-241b2.5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
I-set
Ig_3
V-set
C2-set_3
Ig_2
AAA_16
ig
AAA_22
AAA_18
Ig_CD22
AAA_30
C1-set
TsaE
NB-ARC
Rv1476
Mg_chelatase
nSTAND3
ABC_tran
AAA_25
C2-set_2
AAA
Motif
Other DBs
NCBI-GeneID:
120806567
NCBI-ProteinID:
XP_040013801
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All DBs
Position
LG20:11897621..11908806
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AA seq
504 aa
AA seq
DB search
MDWSHFVILQVIFQPSLSVLFTVEVEQTMYKSELGGDVVMGCRFQPKPSNPDTDLKVTWH
WITSASALEVYQMNKGQEHSISQEFQGRVKLLMEELKEGWAKLQISRLKMNDSGTYQCLV
QSGEGADYKTISLSVFAPYKAVTKRIEKAADGDGLLLICQSEGYPESPVVWLGGHVHTYN
PNTTAVSTPDQLFKVTSQIRVSSSEKNNYTCNFTNDGHSATFHVPDEIPIPQVKNNAVIV
VLSIGMVMGVIITGVLEYRRRKESSPPRNLLANGWGRPVSFACLQINKENEEQRTIFNED
RVQEKLGAFLKAYYSNVSFSTEVRCHLGTFDVEELPHRLQNIEGQAVKLQALIPEAGETL
LLEGTAGSGKTTVAHILVSSWTEGPTHALTNLLDLSMIQLLLYVDCSTLKRDLFQEIVTQ
LSFTEETSTEDELRTVLTRSSEALLLLDGYREGNQVFDESLKRFLSEKGGSRVLVMACPG
HCPVLKETVGPRGLLKLQTQTVKY
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggactggagccattttgtaattttacaagtcatatttcagccatctctttcagtcttg
ttcactgttgaggtagagcaaaccatgtacaagtcagagttgggaggagatgttgtgatg
ggatgcagatttcagcctaaaccatcaaatcctgataccgacctgaaggtgacctggcac
tggatcacctctgcctctgctctggaagtgtaccagatgaataaagggcaggaacactca
atatctcaggaatttcaaggccgtgtgaagcttctgatggaggaactgaaggaaggctgg
gccaagttacagatctccaggctcaagatgaatgactctgggacctatcagtgtttggtg
cagagcggagaaggagctgactataaaacaataagtttgtctgtttttgcaccttataaa
gcagtgactaaacgcattgagaaggccgcagatggggatggattgctgctaatctgccaa
tctgagggataccccgagtcgcctgttgtttggttgggtgggcacgtgcatacatacaat
cccaacaccaccgctgtatcaacaccagaccaactttttaaagtcaccagtcagatacgc
gtcagctcatcagaaaaaaacaactatacatgtaacttcacaaatgatggccactctgca
acatttcatgttccagatgaaatacctattccacaggtaaaaaacaatgccgtcatcgtt
gtattgagcataggaatggtaatgggtgtcattatcactggagtgcttgagtatcgacga
cgtaaagaatccagccctcccaggaatcttctggccaacggttgggggaggcctgtttct
tttgcctgcctacaaataaacaaagaaaatgaggaacagagaactatttttaatgaagat
cgcgtacaggaaaaactgggggcgtttctgaaagcctattattctaacgtctccttcagc
acagaggtgaggtgccacttgggcactttcgatgtggaggagctgcctcacaggctgcaa
aacattgagggccaggctgttaaacttcaagctttaatcccagaagctggagagacactt
cttcttgagggaaccgcaggaagtgggaagacaaccgtagcccacatcctggtctcttct
tggactgaagggcccacacatgccctcactaatctcctcgacctcagcatgattcagctt
ctcttatatgttgactgcagcactctaaagcgtgacttgtttcaggaaatagtgactcag
ctttctttcacggaggagacatcaacagaggatgaactgaggactgtgttaaccaggtcc
agcgaggctctgctgttgttggatgggtacagagaagggaaccaagtttttgatgagtcc
ctaaagaggttcctaagcgaaaaagggggaagcagggtgctggtcatggcctgcccggga
cattgtcccgtgctcaaagagacagttggaccaagagggttgctgaagctccaaacacaa
actgtgaagtactga
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