Xiphias gladius (swordfish): 120806780
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Entry
120806780 CDS
T07311
Symbol
rnf34b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120806780 (rnf34b)
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120806780 (rnf34b)
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120806780 (rnf34b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
Prok-RING_4
PI3K_1B_p101
zf-C3HC4_2
zf-RING_5
zf-C3HC4_4
DUF4518
TPR_TTI1_C
Motif
Other DBs
NCBI-GeneID:
120806780
NCBI-ProteinID:
XP_040014152
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Position
LG20:12941531..12958545
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AA seq
382 aa
AA seq
DB search
MKAGASSMWASCCGLLNEVMGTGTVRTQQPGFGAGAGPFRFAPSAGYSTYPPTSSGSAGQ
LCKACGLAFSVFRRKHICCDCKKSFCALCSVLQENLRCCTTCHLLRGTAFQRPQLMQLRV
KDLRQYLLLRNIPTDTCREKEDLVDLVLCHQGARETQRAALEEEDEEEEEDTHGEEEEEE
DDGGDDTDSLHSLPHSRAASPPSTTRSTSEQSVLSASQGDVLSPSDSSGTTSQEHEDTPT
ASLLNLEPTENIIEVSPATQRRIRASLSDLDNEEAIENLSVRQLKEILARNFVNYSGCCE
KWELLERVHRLYRENEQNRKSNGVKAQLAADENLCRICMDAMIDCVLLECGHMVTCTKCG
KRMSECPICRQYVVRAVHVFKS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgggggcatcgtccatgtgggcgtcatgctgtgggctgctgaacgaggtgatg
ggcacgggcacggtgcggacgcagcagccagggttcggagcaggggcggggcccttccgc
ttcgcccccagcgctgggtactccacctacccccccaccagctcagggagcgctggacag
ctgtgcaaggcctgcggactggccttctctgtcttcagacgcaagcacatctgctgcgat
tgtaagaagagtttctgcgccctgtgctcggtgctgcaggagaacctgcgctgctgcacg
acctgccacctgctgcgtggcacagccttccagaggcctcagctcatgcagctcagagtg
aaagacctgcgccagtacctgctgctgcgtaacatccccaccgacacgtgcagggagaaa
gaggacctggtggacctggtgctctgtcatcagggggcgagggagacccagagagcagcg
ctggaagaggaggacgaggaggaggaagaggacacacacggagaggaggaggaggaagag
gatgacgggggagatgatacagacagtctgcactcgcttccccactcacgcgccgcctca
cccccctccaccacgcgctccacctctgaacagtcggtcctctccgcctctcagggagac
gtgctcagcccaagtgacagctcagggaccaccagccaggagcatgaggatactccgaca
gcgtccctcttgaacctggagcccactgaaaatatcatagaggtcagcccggcaacacag
aggaggatcagggcctcgttgtctgatctggacaatgaagaggcgatagaaaacctctcc
gtccgccagctgaaggagattctcgccaggaactttgtcaattactccggctgctgcgaa
aagtgggagctcctggagcgagtgcatcgactctacagagaaaatgagcagaacaggaaa
tccaacggtgtcaaagctcagctggcggctgatgaaaacttgtgtcgcatctgcatggac
gccatgatcgactgcgtgctgctggaatgcggtcacatggtaacctgcaccaaatgcggc
aagaggatgagcgagtgccccatctgcaggcagtacgtagtgcgggctgtgcacgtcttc
aagtcttaa
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