Xiphias gladius (swordfish): 120807040
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Entry
120807040 CDS
T07311
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00310
Lysine degradation
xgl00514
Other types of O-glycan biosynthesis
xgl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120807040 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120807040 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xgl01003
]
120807040 (colgalt1a)
Enzymes [BR:
xgl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120807040 (colgalt1a)
Glycosyltransferases [BR:
xgl01003
]
O-Glycan biosynthesis
O-linked Gal type
120807040 (colgalt1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
120807040
NCBI-ProteinID:
XP_040014606
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Position
LG3:16756750..16763875
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AA seq
612 aa
AA seq
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MPGANFACLPAALLLWLLSCCGPVRGYFAEERWNPESPLLAPRVLVALLCRNSEHSLPFF
LGTIERLNYPKERMALWVATDHNEDNTTAILRDWLVKVQKFYHNVEWRPKEEPRRYADED
GPKQWTDLRYEHVMKLRQVALESAREMWADYFMLVDCDNLLTNPNVLWKLMKENKTIIAP
MLESRAAYSNFWCGMTSQGYYRRTPAYIPMRKQVRRGCFAVPMVHSTFLIDLRKEASRQL
AFHPPHPDYSWAFDDIIVFAFSARMADVQMFVCNKETYGYFPVPLRSHNTLQDETDSFMH
SLLEVNVRNSPVMPSKYIRVPRKQPDKLGFDEVFMINLQRRTDRRDRMLRTLYEQEIACK
IIAAVDGKAMNVSEIHALGIHMLPGYSDPYHGRPLTKGELGCFLSHYKIWKEVVERRLYT
SLVIEDDLRFEIFFKRRLMNLMSEVKDEGLDWDLIYIGRKRMQVDHPEKAVPNIHNLVEA
DYSYWTLGYMISLQGAEKLLKAEPLKRILPVDEFLPIMYNKHPVSDYMEQFETRDLKAFS
AEPLLVYPTHYTGDPGYISDTETSTVWDNDKVRTDWDRARSGKTQEQAEISTEAQNSDVL
QSPLDSTARDEL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcccggtgcaaatttcgcctgcctccccgccgccctgctcctctggctcctgtcctgc
tgcggtccggtccgggggtacttcgcggaggagcgctggaaccccgagtcgccgcttctc
gccccccgggtcctcgtcgccctcctctgcaggaactccgagcactctttgccgtttttc
ctcggtaccattgagcgcctcaactatcccaaggagcgtatggctctgtgggtagcaacc
gatcataatgaggacaacaccacagccattctgcgtgactggcttgtcaaggtgcagaaa
ttttaccacaatgtggaatggaggccaaaagaggaacccagacgttatgccgatgaagat
ggtccaaagcagtggacagacctccgttatgagcatgtcatgaagcttcggcaagtagca
ctggagtcagctcgcgagatgtgggcggactactttatgttggtggactgtgataacctc
ctcaccaatcccaacgtgctctggaagctcatgaaagagaataaaaccattatcgctccg
atgcttgaatcccgtgcggcctattcaaacttttggtgtggaatgacctcgcagggttac
tataggcgcacccctgcctacatacccatgaggaagcaggtgcgtaggggctgttttgct
gtgcccatggtccactccaccttcctgatagacctcaggaaagaggcatccaggcagctg
gcctttcacccaccgcacccagattacagctgggcttttgatgacatcattgtgtttgcc
ttctctgctcggatggcagatgttcaaatgttcgtatgtaacaaagagacctatggttac
ttccctgtgccccttcgatcccataatactttgcaagatgaaactgacagcttcatgcac
tccctgctggaggttaatgtgcgaaattccccagtgatgccttccaaatacatacgcgtt
cctagaaaacaacctgacaaactgggctttgatgaggtgttcatgataaacttgcagagg
cggactgaccgccgagatcgtatgctgaggacattgtacgagcaggagattgcttgtaag
atcattgcagctgtagatggaaaagcgatgaatgtcagtgaaattcatgccctgggcatc
cacatgctccctggatacagtgacccctatcacgggcgcccactgacaaaaggagagctg
ggatgcttcctgtcccactataaaatctggaaagaggttgtggagcggcgcctctacacc
tctcttgtgattgaagacgacctgcgcttcgagatcttcttcaaacgtcgcttgatgaac
ttgatgagtgaggtgaaggatgaaggactggactgggatctcatttatatcggtcggaag
agaatgcaagtggatcacccagagaaagccgtgcctaatatacacaatttagtggaagca
gactattcatattggacactaggttatatgatatcattacaaggtgctgagaagcttttg
aaagcagaaccactaaagaggattttgccagtggatgagtttcttcctatcatgtacaat
aaacatcccgtatctgattatatggaacagtttgaaaccagggacctgaaggctttttcc
gcagagcctcttctggtgtatccgacgcactacacgggcgacccaggctacatcagcgac
actgagacctccacagtgtgggacaatgacaaggtccgtacggactgggacagagcgcgc
tcaggaaaaactcaggagcaggctgagatcagcactgaggcccagaactcagatgtacta
cagtcccctttggacagtacagcacgggacgagctatga
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