KEGG   Xiphias gladius (swordfish): 120807125
Entry
120807125         CDS       T07311                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120807125 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xgl03019]
    120807125 (wdr82)
   03036 Chromosome and associated proteins [BR:xgl03036]
    120807125 (wdr82)
Messenger RNA biogenesis [BR:xgl03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     120807125 (wdr82)
Chromosome and associated proteins [BR:xgl03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     120807125 (wdr82)
    COMPASS/SET1 complex (yeast)
     120807125 (wdr82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_WDR75_1st NBCH_WD40 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_HPS5 Beta-prop_DCAF4 MinC_C VPS8_N
Other DBs
NCBI-GeneID: 120807125
NCBI-ProteinID: XP_040014772
LinkDB
Position
LG21:14418684..14423103
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSSNGETIISSSDDDSLVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVTSLSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGINSEMVKLYDLRSFD
KGPFATFKLQYDRTCEWTGLKFSNDGKLILLSTNGGALRILDAFKGAVLHSFGGYNNSKG
VTLEASFTPDSQFVMIGSEDGKIHVWNAESGMKVALLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaatgtgctgcggagcttcagggttgctaaggtgtttcgagaaaac
tcagacaaaataaactgcttcgatttcagttcaaacggagaaacaataatttccagcagc
gacgacgattccttagtcttgtacgactgccaagagggaaaacccaagaggactctctac
agtaaaaagtatggagtggatctgatcaggtacacacatgctgcaaacactgtggtctac
agttccaacaaaattgatgatactatccggtacctgtcccttcatgacaacaaatacatt
cgctactttcctggacataacaaaagggtgacatctctctccatgtctcctgtggacgac
acatttatttctggctcattagataaaactatccgactgtgggatctgcggtcaccaaac
tgccagggtctgatgcacctgcaggggaagccagtgtgctcctttgatccagagggtctc
atttttgctgctggaataaattcagagatggttaaactttatgacctgcggtcgtttgac
aagggtccatttgcaactttcaagctccagtacgatcggacctgcgagtggactgggctc
aaatttagcaatgacggaaaactaattcttctttctaccaatggcggagctcttcgcatc
ttagatgcttttaagggtgctgtgctacattcctttgggggctacaacaacagtaaaggt
gtaacactggaggcatcattcactcctgactctcagttcgtaatgattggctctgaggat
ggaaagatccacgtgtggaatgcggagagcggtatgaaggtggctttattagacgggaag
cacacaggaccaattacttgcctgcagttcaaccccaagttcatgacgtttgcaagtgcc
tgctccaacatggcattctggctgccaaccattgatgactga

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