Xiphias gladius (swordfish): 120807190
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Entry
120807190 CDS
T07311
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120807190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120807190
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xgl03310
]
120807190
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
120807190
Nuclear receptors [BR:
xgl03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
120807190
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
120807190
NCBI-ProteinID:
XP_040014865
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Position
LG21:19737118..19743410
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AA seq
591 aa
AA seq
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MPCVQTQYASLPHDTYINSEFLNPDLSAKLVMDISGQKDQLSTSSLPSINTLVGNGYVGE
FDAYSCKITTAPPASTFSFNHATVAESSSPQMQNQAFKLDDLQVYGCYPGSFALSCLDET
LSSCGSDYYGSPVYAAASPPTPGFQTQSAPVWDSPFSPYPSAPPSSVADKAAMAQQLSFF
TFSPEPGQHSPQGHHQEAQSGQDDPFFLSHQQHVSPLHCPPMSLEHGPLESPRLVEGAMI
SPKNHNPGSSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLTNKDCPVDK
RRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKTLSEASSTTSSVNIISSLV
RAHLDSNPTIGKLDYSKYQETVDNLKEKEDAGDIQQFYDLLTGALDVIRNWAETIPGFTD
FCTEDQELLLESAFVELFILRLAYRSNPEKNKLIFCNGVVLHRLQCVRSFGDWIDSIMDF
SQSLHRMNLDVSLFACLAALVIITDRHGLKEPKRVEDFQNHLITCLREHVSGNGSEPSRT
QPNYLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVEKIFMDTLPF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgtacaaacccaatatgcatctctgccccatgacacatacatcaactctgag
ttcttgaatcctgacctcagtgccaaactggtgatggacatcagtggccaaaaggaccag
ctgtctacatcttcattgcccagcatcaacaccttggtgggaaacggctatgtgggggag
tttgatgcttattcctgcaagattaccaccgctcctcctgcctctacgttttcattcaat
catgccactgtagctgaaagctccagccctcagatgcagaaccaggccttcaagctggat
gatctccaggtgtatggctgttacccaggctccttcgcgctcagctgcctcgatgaaaca
ctgtcgtcatgtggctcagactattatggcagcccagtttacgctgctgcttctcctcca
acaccaggctttcagacccagtctgcacctgtctgggattcccctttcagcccctacccc
tcagcccccccctcctctgtggctgataaggccgccatggctcagcagctctcctttttc
accttcagccctgagccggggcagcactctccccaggggcatcatcaggaggctcagtca
ggccaggacgaccctttcttcttgtctcaccagcagcatgtatctccacttcattgtccc
cccatgtccctggaacatggacctctggaaagccccaggctagttgagggggccatgata
tctcctaaaaatcacaacccaggatccagtgagggccgatgtgcagtttgtggcgacaat
gcatcctgtcagcactatggagtccgcacctgtgagggctgcaaaggtttcttcaagcga
actgtacagaaaaatgcaaagtatgtgtgccttaccaataaagactgtccggtggacaag
aggaggagaaatcgctgccagttctgccgtttccagaaatgtcttgcagtgggaatggtc
aaagaagttgttcgcacagacagcctcaaaggtcgccggggtcgcctgccctctaaaccc
aagaccttatccgaggcttcgtccacgacctccagtgtcaacatcatatcctctcttgtc
agggcacatttagactcaaacccaaccattggaaagcttgactactccaagtaccaggag
acagtggacaacctgaaagaaaaggaggatgcaggcgacatccaacagttttatgacctc
ctgaccggtgccttggatgtgatcagaaactgggctgaaaccatcccgggtttcacagac
ttctgcacagaggaccaggagctgctccttgaatctgcctttgttgagctcttcatcctc
cgactcgcatacaggtcaaacccagagaagaacaagctaatcttctgcaacggcgtggtc
ctccaccggctgcagtgcgttcgcagttttggagactggattgactccatcatggatttc
tcccaaagtcttcaccgcatgaacttagatgtctccttgtttgcctgccttgcggcactt
gttatcatcactgatcgccatggcctcaaggagcccaaacgagtcgaggactttcagaat
catctcatcacttgtttaagggaacacgtgagtggaaacggatcagaaccgagtaggacc
cagcccaactatctttctcgtcttctgggcaaactccccgaactgaggactctgtgcaca
cagggactgcagcgaatcttctacctaaaactggaggacctggtcccccctccaccaatt
gtggagaaaatctttatggatactctgccgttctga
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