Xiphias gladius (swordfish): 120807380
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Entry
120807380 CDS
T07311
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00310
Lysine degradation
xgl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120807380 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120807380 (prdm2b)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120807380 (prdm2b)
Enzymes [BR:
xgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
120807380 (prdm2b)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120807380 (prdm2b)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120807380 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
120807380
NCBI-ProteinID:
XP_040015289
LinkDB
All DBs
Position
LG21:14186644..14200812
Genome browser
AA seq
1737 aa
AA seq
DB search
MAIIGGTVETLDEIPAHVWKGLPDCLTLGPSAINQSRIGVWATRVIPKGKRFGPFAGEKK
KRSQVTSNVYMWEVYFPARGWMCVDATDPTKGNWLRYVNWARSTEEQNLFPLEINRAIYY
KVLRPIGPGEELLVWYTVEDNPEITAALEEERASSLSRKNSARSKRARRKLLERARPAGL
GGFKKISGTNPTVKEMWDGEEGLKEENERPSALGTSQELQETHPIGSTDHKDVQEMSAGL
MEKGNGEEEEEEEEEEEEEEEEEEEEEDADDLVDTAAIQQQTAQHSPSADSIKNKQPGLL
LTCGEESHKDSELKFESSSLTGQEPEVDPDPDLDIDPDPDGDLESDPHGESYPCQHCERH
FSTRQGLERHIHIHAITNQQTQLFKCRYCSKPFGSQVGRRRHERRHESGLKKRPGSLAGT
ASFLSPVVQSDGSSPDCTSPTSQYVAIGSQFTGGPLHNSEMQRKELGPHADRPFILDENG
ESKELHPCKYCSKAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQEAMAQQQQQRDESP
SASPPPVYVPSADTEDEADRDDYTVDISKNISENLSFYIDGKIVSTSSVSSCEVIEVDSR
SAALFGLDTVIISPNQIGQALKVEGRTNAAKQVSNIGQPAAKRRTSTPPFVPSLKVETES
ASFTASSSSSSSSSSSSSNLLVGGLFQQATESSAFQREKTVYLSPKLKQLLQTQDIQKST
IALITDSHRLASPLSVMPLQGTSGRFKRRTASPPSSPQLSPACKTESCKAEIASSYTLKV
PKLESHSVSPPGSLLDKDDGDTLSPSGNNMHSQTSSSSGGNSCNQQPLDLSNSISRKSDS
LNKVLGDSALDLSLHRKSTVEPEVKGSPAPQPLIKKRKPNTSMLEKVLMNEYVGLTLPGE
EGPSVLANLSFHSRSPNVASESAHPSPPSLTPVTMNPSSPGTSSLTSPTPPPPELPTIPS
PPAIASSPLSQPSDSSALRPLPILSPKMSPRSVEHKPLSDSEEIFSAEENKDEEEDHISE
PLDSPNTPLKDPLNRSTPSPPEPESIDLHAIEEVTVTRTCNSVLNDKLNQQLESGTEESL
KSDFAALSAQPESPSSSPSPPPASHDPSPTLFPQSLLQIKIKEEPPHCIDELSIMNHAPQ
DGGDASPQPAAHDKLSDKTSEAEEVDSTYCKTFVCNVCEEPFSSIKELSGHITDHAADWP
FKCEFCVQLFGDAPALLAHRTTLHGVGRIFVCSVCSKEFAFLCNLQQHQKDLHPNETCSN
TTVESGKLRPQNYTDPSRAKEESSLSTTAQEVTDEPAPPSETDLAKEEPDVNGNHAEDGA
EDPNEELYTTIKIMASEGGKPKGPDVRLGMNQHYPSYKPPPFPYHSRSHAGSVASATNFT
THNIPQTFSTAIRCTKCGNSFDNMPELHKHILACANASDKKRYTPKKNPIPLKQIVKSPN
GVVSPTAATAGQSAFRRMGQPKRLNFNQDTGKTKMSALSKKKNQLVQKAISQKNKAATTA
KKATVKVEEEQASNVCPHCSREFTYPASLSKHMAVSCPMKPVVKKGKKGLAEVKKEAVSV
VDKNMNLRKKASDCEIPQTQPESKPLGKTRARSSGAVDPEPPQASRGKTAATMGRLKRPA
SFLTPVSASKKTKKGQVQSLPPTLSTPDTPSDSVQRPAMRMQRMGKEAAPKRLAEAKSPP
PPQQLKKEERFSLRTRERVGGPVTRSLQMASAAPPADVKTEEPPMQEPKETHEVLMK
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atggctatcattggagggacggtggaaactctggatgagattccagcccacgtgtggaag
ggtttgcctgactgtttgactcttggaccttctgctataaatcaaagccgcatcggtgtc
tgggccactcgggtcattcctaagggcaagaggtttggtccattcgcgggagagaagaaa
aaaaggtcccaggtgaccagtaatgtctacatgtgggaggtttatttcccagcacggggc
tggatgtgtgttgacgccacagaccccacgaaagggaactggctacgatacgtgaactgg
gcgcgctccactgaagagcagaatctctttcccctggagatcaacagagccatttactac
aaagttttaaggcctatcggaccgggagaggagctgctggtgtggtacactgtggaagac
aaccctgagataacagctgcactggaggaagaaagagccagcagtctgagcaggaaaaat
tcagccaggtcgaagcgagccagaagaaagctgcttgagcgagccagaccggctggtttg
ggtggattcaagaaaataagtggaaccaatcctactgtcaaggagatgtgggatggggag
gaaggtctgaaggaggagaatgagaggccatcagcgttagggacctcgcaggaactccag
gaaacccaccccattggaagcactgaccataaagatgtgcaggaaatgtcagcaggattg
atggaaaagggaaatggggaggaggaggaggaagaagaagaagaagaggaggaagaagag
gaggaggaagaagaggaggaggatgctgacgatttggtggatacagcagcaatacagcag
caaactgctcagcattcaccttcagctgattccataaaaaataagcagcctggcctgtta
ctgacctgtggtgaagaaagccataaggattcagagctaaagtttgagtcttcctcactt
acagggcaagaaccagaggtcgatcctgatcctgatcttgacattgaccctgaccctgat
ggtgaccttgaaagtgatccacatggagagtcatatccctgtcagcactgtgaacgtcac
ttctccaccagacagggtctggagcgtcacatacacattcatgccatcaccaaccagcaa
acacaactgtttaagtgccgatactgcagtaaaccctttggctcacaggtggggcggcgc
cggcatgagagaaggcatgagagtgggcttaagaaaaggcctggctctctggctggaact
gccagttttctcagtcctgtggtgcagagtgatggctcaagtcctgactgcaccagccca
actagtcagtatgtagccatagggtcccagtttactggaggacctctgcacaactctgag
atgcagagaaaagagttggggccccatgctgaccgtccctttatattggatgaaaatggg
gagtcaaaggaactccatccttgcaagtactgcagtaaagcatttggcacacacactaac
atgcggcgacaccaacgcagaatacacgaacggcacttgttaccaaagggagttcgcagg
aaaggaatgctgcttcaagaggcaatggcacagcaacagcagcagcgggatgagtccccc
agtgccagccctccgcccgtctacgtgcccagtgcagacacagaagatgaggcggacagg
gacgattacacagttgacatatccaaaaacatctctgagaatttgagcttctacattgat
ggcaagattgtgtccaccagttcggtgagcagctgtgaggtgatagaggtagactccaga
tctgcagctttgtttggtctggacacggttataatcagcccaaatcagatcggtcaggca
ctgaaggtggaggggagaaccaatgctgcaaaacaagtctccaacataggccagccagca
gcaaagaggagaacatctacacccccatttgttcccagccttaaagtggagacagagtca
gcgtctttcacagcctcttcatcatcttcatcatcctcttcatcttcctcgtctaacttg
ctagtgggaggactgttccaacaagccacagaatcatcagcatttcaaagagagaaaaca
gtttatctctcacctaagctcaagcagctccttcagacgcaagatattcagaaatcaacc
attgccctgataacagacagccatagactagcctccccgctgtcagtcatgccactgcaa
gggacttcgggcaggtttaaaagaagaacagcttctcccccatcgtctccacagctcagt
ccagcttgtaaaacggagagctgtaaagctgagatagcaagctcttacacccttaaggtg
ccaaagctggaaagccacagtgtgtcacctcctgggagcctactggacaaagatgatggg
gacaccctgagcccttctggaaataatatgcacagccaaacttcttctagtagcggagga
aattcctgtaatcaacagcccttggatctgtcaaactccatcagtaggaaaagtgacagc
ttgaacaaggtgctcggggattcagctctggatttaagcttgcatcgtaagagcactgtt
gagcctgaagtaaaaggaagtccagcgccacagccgctaataaaaaagagaaagcctaac
accagcatgcttgaaaaggtgctgatgaatgagtacgtaggtctaactttgccaggagag
gagggcccctcggtcttagcaaacctaagtttccattctcgatctcctaatgttgcatca
gagtctgcccacccctctccgccctctttgacccctgtcaccatgaacccgtcttcacct
ggtacctctagtctgacatcaccaacaccgcctccacctgaactacctactataccatct
ccaccagctatagctagctctcctctctctcagccttcagactcatctgcactaagacct
cttcctatactctcaccaaaaatgtctccaagatcagttgaacacaagcccctgtcagac
tcggaggagattttctcagctgaagaaaacaaagatgaggaagaggaccatatctctgag
ccgttggactccccgaacactccacttaaagatccccttaatcgttcgacaccaagccct
cctgagcccgaatcgatagatctgcatgctatagaagaagttactgtgactaggacttgc
aacagtgtgctaaatgacaaattgaaccaacaacttgaatcaggaactgaggaatctttg
aaatctgactttgctgctctttccgcccaaccagaatccccatcttcctcgccatctcct
ccccctgcatcacatgatccatccccaacactttttccgcaatctctccttcagattaag
ataaaagaagagcctcctcactgcatagatgagttgtcaattatgaatcatgcgcctcaa
gatggtggtgacgcttcacctcagccagctgctcatgataaactgtctgataaaacctct
gaggcagaggaagttgactcgacatactgcaagacttttgtatgtaatgtctgtgaggag
ccgttcagctctatcaaagagctcagtggacacatcactgatcatgctgcagactggccc
ttcaagtgtgaattctgtgtgcaactgtttggtgacgcccccgccctgcttgctcaccgg
acaacactacatggagtgggcaggatctttgtgtgctccgtttgttccaaagagtttgcc
ttcctctgtaacctacagcagcaccaaaaggatctgcatccaaatgagacatgttcaaac
accactgtagagagtggcaagcttaggccacaaaactacacagatccatccagagccaaa
gaggaaagcagtctctcaacaacagcacaagaggtgactgatgaacctgctccacccagt
gagactgatttagcaaaagaagaacctgatgttaatggtaatcatgcagaggatggagca
gaggaccccaatgaggagctatacactacaataaagatcatggcctcagaaggagggaag
cctaaaggcccagacgttcgccttggcatgaatcaacactaccccagttataaaccaccc
ccttttccttatcatagccgttcccatgctggctctgtggcctcggctactaacttcacc
acccacaacataccacaaactttcagcactgccattcgctgcaccaagtgtggcaacagc
tttgacaacatgcccgaactgcacaagcatatattggcctgtgccaatgctagtgataag
aagcgttacactcccaagaaaaaccccatccccctcaagcaaatagtgaagagccctaat
ggagtcgtgtcacccacagcagccactgcaggccagagtgctttccgtagaatgggtcaa
ccaaagagacttaactttaatcaagatacaggtaaaacaaaaatgagcgccctcagtaag
aagaaaaatcagctggtccagaaggcaatttcacagaaaaataaagctgccactactgcg
aagaaggctaccgttaaagttgaagaagagcaggcctcgaacgtctgcccccactgcagc
cgggagtttacttatcctgcaagtctcagtaaacatatggcagtcagctgtcccatgaag
cctgttgtaaaaaagggcaaaaaaggtctagcagaggtgaaaaaagaggcagtgtctgta
gtagataaaaacatgaatcttaggaagaaagcctcagactgtgaaataccacagacacag
cctgagagtaaacccctgggaaagaccagagctcgtagctctggagcagtagaccctgaa
cccccccaggcaagcagaggaaaaactgctgctactatgggccgactaaagaggcctgct
tcgttcctaaccccagtttctgctagcaaaaaaactaagaagggccaagttcagtctcta
cctcccaccctgtcaaccccggacactcccagtgactcagtacaacggccagccatgaga
atgcagcgtatgggaaaggaggcagcacccaagagattagcagaggccaaatctccacca
ccaccacaacagctgaagaaagaggagcggttctccctgcgaacaagggagagagtaggt
ggtccagtcaccaggagcttacagatggccagtgctgctcctcctgctgatgttaaaaca
gaggaaccaccaatgcaagagccaaaagagactcatgaggtgctgatgaagtga
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integrated database retrieval system
