Xiphias gladius (swordfish): 120807425
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Entry
120807425 CDS
T07311
Symbol
nob1
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120807425 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xgl03009
]
120807425 (nob1)
03051 Proteasome [BR:
xgl03051
]
120807425 (nob1)
Ribosome biogenesis [BR:
xgl03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120807425 (nob1)
Proteasome [BR:
xgl03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120807425 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
WRNPLPNID
DZR_2
Zn_ribbon_15
HypA
DZR
Zn_ribbon_8
Zn_Ribbon_1
DUF7129
D123
Motif
Other DBs
NCBI-GeneID:
120807425
NCBI-ProteinID:
XP_040015434
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All DBs
Position
LG1:complement(34702966..34709373)
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AA seq
476 aa
AA seq
DB search
MAPTLVEHVVADAGAFLKKAPLQDIGRNIYTLRDVVDEIRDKPTRRSLAFLPYQLNFKEP
HPEHIRHVTEFSKKTGDYPSLSATDIKVLALTYQLELEHVGSQHLRREPEIKVNVHSTQR
HPETPVNVAGFHFPSKKPADSLSSSRQTETETETSDPNDSEEFNSFQFWREPLPTVDSDL
LELLDPVEDLDLNNKQNQTSPATADGEEFNSFQFWREPLPTVDDSLLDLLKADGVSVSDS
RSDTSPQTEDQSDDEDKENEPEEEEEDDGGGWITPSNIRQVKMESADWTAPADVRVGCLT
TDFAMQNVLIQIGLHILSVNGMVIKQARNYILRCHACFKTTTNMNKEFCPHCGNKTLKKL
AVTVRDDGSMQMHFSKNPKVLNPRGLRYSLPLPQGGKHVTNPQLVEDQRFPQQRLSRKAR
QKTDVFNPDYVAGASPFCENDIYSRAANLQIRDGQCGGGRRRANPNAARKKFVKKK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgaccctggtggagcatgttgtggctgacgcaggagcgtttttaaagaaagct
cctctgcaggatatcggcaggaacatctacactctgagagatgtggtggacgagatcaga
gacaaacccaccaggaggagtctggctttcctgccctaccagctcaacttcaaagaaccg
catcccgaacacatcagacacgtgacagagttctccaagaagaccggagactacccgagt
ctctcagccaccgacatcaaagtcctggctctgacctaccagctggagctggagcacgtc
ggctcccagcacctgaggagagagccggagatcaaggttaatgtccacagcacacagcgc
cacccagagactcctgttaacgttgcaggatttcactttccctccaagaaacctgcggac
agtttgagcagcagcagacagacggagacggagacggagacttcagaccccaacgacagt
gaagagtttaacagcttccagttctggagggaaccgctgccgaccgtcgacagcgacctg
ctggagctcctggatccagtggaggatttggatttgaataacaaacagaaccagacgtct
cctgcgacagctgacggcgaagagtttaacagcttccagttctggagagaaccgctgccg
actgtcgacgacagcctgctggatttactgaaagcggatggtgtgtcagtatcagacagc
aggtcggacacatcgccacagacagaggaccaatcagacgacgaggacaaagagaacgag
cctgaagaggaagaggaggatgatggaggaggttggatcactcccagtaacatcagacag
gtgaagatggagtcggctgattggacggctcctgctgatgtcagagtcgggtgcctgacc
accgacttcgccatgcagaacgttctcattcagatcggacttcacattctctctgttaac
gggatggtgatcaaacaggcgaggaactacatcctgcggtgtcacgcctgcttcaagacg
accactaacatgaacaaagagttctgtccccactgtggaaacaaaactctgaagaagctg
gcggtgacggtccgcgatgacggcagcatgcagatgcatttctccaaaaaccccaaagtg
ctgaaccccagaggactgaggtactcgctgcctctgcctcagggagggaaacacgtcacc
aacccccagctggttgaggaccagcgtttcccccagcagagactgtcccgaaaggctcgt
cagaagaccgacgtcttcaacccggactacgtggccggagcctcgcctttctgcgagaac
gacatctacagccgagcggccaacctgcagatcagagacgggcagtgtggaggcggcagg
agacgagccaaccccaacgctgcccgcaagaagttcgtcaaaaagaagtga
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