Xiphias gladius (swordfish): 120807588
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Entry
120807588 CDS
T07311
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
xgl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120807588
03015 mRNA surveillance pathway
120807588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120807588
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120807588
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120807588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
PP-binding
Motif
Other DBs
NCBI-GeneID:
120807588
NCBI-ProteinID:
XP_040015740
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All DBs
Position
LG21:21085873..21090907
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AA seq
488 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGNLQIKEKPEENGTAANATDASSAAAKSEAEGENKATDED
DKEDKAAQSLLNKLIRNNLVNNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRYPQCLCVSPT
YELALQTGKVIEQMGKHYPEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCSKFKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEESVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFNKKIEKLDTDDL
DEIEKIAG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcccaggcagtggacgaacaagaagccgcggcagaatcgatc
ggtaaccttcaaattaaagagaaaccagaagaaaatggcacggctgcaaacgcaacagac
gcaagcagtgcagctgcaaagtccgaagctgagggagagaacaaggcaacagatgaggat
gacaaagaggacaaagcggcacagtcattgttgaacaagctgattcggaataatcttgtc
aataatactaaccaagtggaagttcttcagaaggatcccaactctccgctctactctgtc
aagtcctttgaggagttgcgactcaaacctcagctgcttcagggcgtgtacggtatgggt
ttcaaccggccatctaaaatccaggagactgccttacccatgatgctggctgaacctcca
cagaatctgattgcgcagtcgcagtcaggaacagggaaaacagctgcctttgtcctggcc
atgctcagccatgtagaccccaacaacagatatccccagtgcctgtgtgtgtcacccacc
tatgaacttgcgcttcagactggtaaggtgatcgagcagatgggcaaacactatcctgag
gtcaaactagtctacgccatcagaggaaataaattgcagcggggcatgaagctgcaggaa
cagatagttattggcacacctggtaccatgctggactggtgcagtaaattcaagttcata
gaccccaagaagatcaaggtctttgtgctggatgaggctgatgtcatgattgccacacag
ggtcaccaggaccagagtatccgcatccagaggatgctgcctaaaaactgccaaatgttg
ctgttctcagccacgtttgaagaatcagtgtggaacttcgcccagcgcatcgtccctgac
cccaacatcatcaagctgaaaagagaggaggagacgctggatactataaaacagtactat
gtgttgtgcaacagcaaggaggagaagttccaagccctctgtaacatctacggagccatc
accatcgcccaggccatgatcttctgccatacaaggaagactgccggctggctggcaggg
gagctgtccagagaaggccaccaggtggcgctgctcagtggcgagatgcaggtggagcag
agggctgctgtcattgaacgcttcagagatggcaaggagaaggtcctggttactacaaat
gtttgtgctcgaggcattgatgtcgagcaggtttccgtggtgatcaactttgacttgcca
gtggacaaagacggaaaccctgacaacgagacatatttgcacaggattggccgcacaggt
cgatttggcaaaagggggctggccatcaacatggtggacagcaagatgagcatgaacatc
ctcaacaggatccaggagcatttcaataaaaaaattgaaaaactagacacggatgatctg
gatgaaattgagaaaatcgctggctaa
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