Xanthomonas graminis: KFS84_03870
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Entry
KFS84_03870 CDS
T10672
Name
(GenBank) endopolygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xgm Xanthomonas graminis
Pathway
xgm00040
Pentose and glucuronate interconversions
xgm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KFS84_03870
Enzymes [BR:
xgm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
KFS84_03870
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-ProteinID:
UKE55015
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All DBs
Position
880340..881749
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AA seq
469 aa
AA seq
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MTSPAFGCLLLLALVTLDASAATGDTRVVAEPAMPSLCDTLDATLQADARLFGDADERNA
PDTARIQAALGRCAANGGRSAVLLRAGAGDAFLSGPLNIGGNVTLVIDAGVTLFASRKPS
DYQVAGASACGKAAGSSGGCRALLNLKGKSLGVMGLRDGAGRQGSIDGRGDLPMLGGSDS
WWQFGEKAKASGLTQNSPDLIKVQNASDVSVYHVNLVNAPYFHLFAHIADGLTVWGVRVK
APASSPNTDGLDLDSVSNATLYDNDVMSGDDGVAIKTIASRSANISVRDSRFYGTHGISI
GSEVMYGVDNVLIDGNSVLGSDADGRPSTDNNGLRIKTGLAKGGPVSDVTYRNTCLFGVA
NALVINPLYGGGSSGTVPSFANIVINGLKAQGSVKGKGSSVRGYDASAPLDLVLANVSVD
FTALKASNARIGLDRSNLQPSADSTVSTYATSVSGAVSACDSKPVFPAL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgcccgcgttcggttgcctgctgctcctggccctggtcacgctcgacgcatcc
gccgcgaccggcgatacgcgggtggtcgccgaacccgcgatgccgagtctgtgcgacacc
ctcgatgccacgctgcaggcggacgcgcgcctcttcggcgatgccgatgagcggaacgcg
ccggacaccgcgcgcatccaggccgcgctgggcaggtgcgccgccaatggaggacgttcg
gcggtgctgctgcgtgccggcgccggcgacgccttcctcagcgggccgttgaacatcggc
ggcaacgtgaccctggtgatcgatgccggggtgacactgttcgcctcgcgcaagccgtcc
gactatcaggtcgccggcgccagtgcctgcggcaaggccgccggctccagcggcggctgc
cgcgcgctgctcaatctgaaaggcaaatcgctgggcgtgatgggcctgcgcgacggcgct
ggccgccagggcagcatcgacggccgcggcgacctgccgatgcttggcggcagcgacagc
tggtggcagttcggggaaaaggccaaggcgagcggcctgacccagaacagccccgacctg
atcaaggtgcagaacgccagcgacgtgagcgtctatcacgtcaatctggtcaacgcgccg
tacttccacctgttcgcgcacatcgccgacggcctcaccgtctggggcgtgcgggtcaag
gcgccggccagcagtccgaacaccgacggccttgacctggacagcgtcagcaacgccacg
ctctacgacaacgacgtgatgagcggcgacgacggcgtggcgatcaagaccatcgcctcc
agatcggccaacatcagcgtgcgcgactcgcgcttctacggcacccacggcatctccatc
ggcagcgaggtgatgtatggcgtggacaacgtcctgatcgacggcaacagcgtgctcggc
agcgacgccgacggcaggcccagcaccgacaacaacggcctgcgcatcaagaccgggctg
gccaagggcggcccggtcagcgacgtcacctatcgcaacacctgcctgttcggcgtggcc
aatgcattggtgatcaacccgctgtacggcggcggcagcagcggcaccgtgccgagcttc
gccaacatcgtgatcaacggcctgaaggcgcaggggtcggtgaagggcaagggcagttcg
gtgcggggctacgacgcctcggcgccgctggacctggtgctggccaacgtgtcggtcgac
ttcaccgcgctgaaggccagcaatgcgcgcatcggcctggaccgctccaacctgcagccg
agcgccgacagcacggtcagcacctatgcgacctcggtgtccggcgcggtgtcggcatgc
gacagcaagccggtgtttcccgcgctgtag
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