Xanthomonas graminis: KFS84_04300
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Entry
KFS84_04300 CDS
T10672
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xgm Xanthomonas graminis
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KFS84_04300
Enzymes [BR:
xgm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
KFS84_04300
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
UKE55079
LinkDB
All DBs
Position
complement(977946..979544)
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AA seq
532 aa
AA seq
DB search
MQRLLSLLLCCCVFCGALPAAAQSGNFGVTRSGKRIVVDSGAHLVFSVDTGNGDIVSMRY
AGSELQSPEGKGSQIASGLGTAAVAARTIGDTIVVSAKAGDLTQYYMARKGRDALYMATY
APTLLPIGELRFVTRLDVAKLPNAEREPDCNVGEAIESHDVFLLPDGRTSSKFYSARRAI
DDAMHGVSGPGVAVYMLMGDRERSSGGPFFKDIATQKTAATHELYNYMFSNHTQTEPYRG
GLHGVYALLFTDGGAPWAAATDLGFVDATLGLQGFLDESGRGAVSGRVSGVAAGQPARVG
LSNGDAQYWAAAAANGTSRIDGVRPGRYRITLYQNELEVAQNTLEMYAGATAQAALQAAP
QPDRVQWQIGVPDGTPGGFRNAALLASAHPSDTRMAPWGPLVYRVGSSAIDDFPAVQWRG
VNTPTRIEFVLAADDVRDYRLRLYIPLAQADGRPQVRVHGRWTGPLPSVPVQPDTRGITR
GNNTVYDIDIDIPATALQAGVNALQIDIASGSPDNGFLGPALVFDSVQLLAM
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcctgctctccctgctcctgtgctgctgcgttttctgcggcgccctgcccgcc
gcggcgcaaagcggaaacttcggtgtcacccgcagcggcaagcgcatcgtcgtcgatagc
ggcgcccacctggtgttcagcgtggatactggcaacggcgacatcgtgtcgatgcgttac
gccggcagcgagctgcagagtcccgaaggcaaaggttcgcagatcgcctccggcctcggc
acggccgcggtcgcggcacgcaccatcggcgacaccatcgtggtctcggccaaggccggc
gacctgacccagtactacatggcgcgcaagggacgcgacgcgctgtacatggcgacctat
gcgcccacgctgctgccgatcggcgaactgcgcttcgtcacccggctcgatgtcgccaag
ctgccgaacgccgagcgcgaacccgactgcaacgtcggcgaggcgatcgagagccacgac
gtgttcctgctccccgatggccgcaccagttccaagttctactcggcgcggcgcgcgatc
gacgacgccatgcacggcgtcagcggtcccggcgtagcggtctacatgctgatgggcgat
cgcgaacgcagttccggcggcccgttcttcaaggacatcgccacgcagaagaccgcggcg
acccacgaactgtacaactacatgttttccaaccacacccagaccgaaccctatcgcggc
ggcctgcatggcgtgtacgcgctgctgttcaccgatggcggcgcgccctgggccgcagcc
accgatctgggcttcgtcgatgcgacgctggggctgcagggcttcctggacgaaagcggc
cgcggcgcggtctccggccgcgtgtccggcgtggccgccgggcaaccggcacgggtcggc
ctgagcaacggcgacgcgcagtactgggccgcggccgcggccaacggcacgtcccggatc
gacggcgtgcggccgggacgctatcgcatcaccctgtaccagaacgagctggaggtggcg
cagaacacgctcgagatgtatgccggcgcgaccgcgcaggcggccttgcaggcagcgccg
caacccgaccgggtgcagtggcagatcggcgtgcccgacggcacgccgggcggtttccgc
aatgccgccctgctcgccagcgcgcatccttccgacacgcgcatggcgccctggggtccg
ctggtgtatcgggtcgggagcagcgccatcgacgattttccggccgtgcagtggcgcggg
gtcaatacgcccacccgcatcgaattcgtgttggccgccgacgacgtccgcgactaccgg
ctgcgcctgtacatcccgctggcgcaggccgacggccgcccgcaggtgcgggtgcacggg
cgctggaccgggccgctgccatcggtccccgtgcagccggacacccgcggcatcacccgc
ggcaacaacaccgtgtacgacatcgacatcgacatcccggccacggcgctgcaggccggc
gtcaatgcgctgcagatcgacatcgcctccggctcgcccgacaacggattcctcggcccg
gccctggtcttcgacagcgtgcaattgctggcgatgtag
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