Xanthomonas graminis: KFS84_05485
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Entry
KFS84_05485 CDS
T10672
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
xgm Xanthomonas graminis
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgm03032
]
KFS84_05485
03036 Chromosome and associated proteins [BR:
xgm03036
]
KFS84_05485
03400 DNA repair and recombination proteins [BR:
xgm03400
]
KFS84_05485
DNA replication proteins [BR:
xgm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KFS84_05485
Chromosome and associated proteins [BR:
xgm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KFS84_05485
DNA repair and recombination proteins [BR:
xgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KFS84_05485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Phage_sheath_domII
Lmo2446-like_N
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
UKE55262
LinkDB
All DBs
Position
1230477..1230749
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELNDAIAAAADISKAEAGRAVDAFVSEVTKALKKGDSVTLVGFGTFQVRDRAERTG
RNPKTGDSIKIAASKNPTFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagccgaactgaacgacgctatcgccgccgctgcggatatttccaaggccgaa
gccggtcgcgccgtcgacgccttcgtgtccgaagtcaccaaggcgctcaagaagggcgac
agcgtgaccctcgtgggcttcggcaccttccaggtgcgcgaccgtgccgagcgcaccggc
cgcaacccgaagaccggcgactcgatcaagatcgccgcgtcgaagaatccgaccttcaag
gctggcaaagcgctgaaggatgccgtaaactaa
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