Xanthomonas graminis: KFS84_05725
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Entry
KFS84_05725 CDS
T10672
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xgm Xanthomonas graminis
Pathway
xgm03030
DNA replication
xgm03430
Mismatch repair
xgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFS84_05725 (dnaX)
03430 Mismatch repair
KFS84_05725 (dnaX)
03440 Homologous recombination
KFS84_05725 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgm03032
]
KFS84_05725 (dnaX)
03400 DNA repair and recombination proteins [BR:
xgm03400
]
KFS84_05725 (dnaX)
Enzymes [BR:
xgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFS84_05725 (dnaX)
DNA replication proteins [BR:
xgm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFS84_05725 (dnaX)
DNA repair and recombination proteins [BR:
xgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFS84_05725 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
AAA_18
AAA_7
PIF1
AAA_30
AAA_19
Mg_chelatase
AAA_assoc_2
AAA_24
AAA_2
nSTAND3
TsaE
Glyco_tranf_2_5
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UKE55297
LinkDB
All DBs
Position
1272106..1273974
Genome browser
AA seq
622 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALTNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCEQGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKY
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
EQIQGQMTRILAAEQIEVDASAIVQLAKAADGSLRDGLSLLDQAIAYAGGALRDDVVRAM
LGTVDRTQVGAMLEALADGDGQRLLQVVAGLAEFSPDWGGVLEALAEALHRIQVRQLVPG
AAVAGLDGLDPAPFAERLRPEIVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPA
GAAPLPAASGSGTTTEGRASAVPVAAAPAAAAPSVAAPSVAAMPAPAAPMMAPAPAAAAV
ADKPTPAPAPVAIPAVLDPPWETAASAPATPPAATVAPVAPAPTATPEPEMAMVPPLAVA
ERTPPEYATPRVLHAAEDWLELVADCGLTGPSRQLAANAAFVSHADGVLRLSLSPGFEYL
QSERSLGELAAALADALGDRPKIVIESGIAVDAETLHERSHRQRGERQSAAETAFLQDPA
VQVLIQQQGARVVPDSIRPYQE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgttctcgcccgcaagtggcgccccaagcgttttgccgagctggtgggg
caggagcacgtggtccgcgcgctcaccaatgcgctggacagcgggcgcgtgcatcacgcg
ttcctgttcaccggcacccgcggcgtcggcaagaccaccatcgcgcgtatcttcgccaag
tcgctgaactgcgagcagggcaccagcgccgatccgtgcgggcagtgcccggcgtgcctg
gacatcgacgccggccgctacattgacctgctggagatcgacgccgcgtccaataccggc
gtggacgacgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgcggcaagtac
aaggtctacctgatcgacgaggtgcacatgctgtccaaggcggcgttcaacgcgctgctg
aagacgctggaagagccgccggagcacgtcaagttcctgctggcgaccaccgacccgcag
aagctgccggtgacggtgctgtcgcgctgcctgcagttcaacctcaagcgcctggacgag
gagcagatccaggggcagatgaccaggatcctggccgccgagcagatcgaggtcgatgcc
tcggcgatcgtgcaactggccaaggccgccgacggcagcctgcgcgacggcctgtcgctg
ctcgaccaggccatcgcctacgccggcggcgcgctgcgcgacgacgtggtgcgggcgatg
ctgggcacggtcgaccgcacccaggtcggggcgatgctcgaggcgctggccgatggcgac
gggcagcgcctgctgcaggtggtcgccgggctggccgagttctcgccggactggggcggg
gtgctggaggcgctggccgaggcgctgcaccggatccaggtgcggcagctggtgccgggg
gcggcggtggccggcctggatgggctggacccggcgccgttcgccgagcgcctgcgtccg
gaaatcgtgcagctgtggtaccagatggccttgaacggtcgccgcgatctgtacctggcg
ccgagtccgcgcgccgggttcgagatggcggtgctgcgcatgctggcgttccgtccggcg
ggcgcggcgccgttgccggccgcatccgggtcggggacgacgacggagggccgtgcgtct
gcggtgcccgtggctgcggcacctgctgccgctgcgcccagcgtcgccgcgccgtccgtc
gccgcgatgcccgcgcccgccgcaccgatgatggcgccagcgccggcagcggctgcggtc
gcagacaagccgacaccggcgcccgcaccggtcgcgatacccgccgtgctcgacccgccg
tgggaaaccgcggcatctgcaccggcaacgccgccagccgcgaccgtggcgccggtcgcg
ccggcccccaccgccacgcccgagccggaaatggcgatggtgccgccgctggccgtcgct
gagcgcacgccccccgaatacgccacaccgcgcgtgctgcacgcggccgaggactggctg
gaactggtcgccgattgcggcctgaccggcccgtcgcggcagctcgccgccaacgcggcc
ttcgtcagccacgccgacggcgtgctgcggctgtcgctgtcgccgggcttcgaatacttg
cagtccgagcgctcgctcggcgaactggccgcggcgctggccgatgcgctgggcgaccgg
ccgaagatcgtgatcgaaagcggcatcgcggtcgatgccgagaccctgcacgagcgctcg
caccggcaacgcggcgagcgccagagcgcggccgaaaccgcgttcctgcaagacccggcg
gtgcaagtgctgatccagcagcaaggcgcgcgggtcgtgcccgattccatccgcccttac
caagagtaa
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