Xanthomonas graminis: KFS84_07905
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Entry
KFS84_07905 CDS
T10672
Name
(GenBank) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
xgm Xanthomonas graminis
Pathway
xgm00040
Pentose and glucuronate interconversions
xgm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
KFS84_07905
Enzymes [BR:
xgm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
KFS84_07905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
UKE55627
LinkDB
All DBs
Position
complement(1804073..1805749)
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AA seq
558 aa
AA seq
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MTTASAMSRLTLALPLLAIASLHANAAVHPPLAQRNQAANVSTGWGTIDQPTLPQNVCMT
LAATLQPIGGSLDGVDADPAYSAPDTLRIQDAISDCPAGSAVQLVTGAHGESGFLSGPLT
LKSGVTLWIDRGVTLFGSRNPRDYDNGLGTCGIANTDKGKSCKPLIYGNAISNSGVVGDG
KIDGRGGSVLTAGPNAGKRSWWDVAYQNVSQGLVQHAPRLLQIDNSKDFTLYALTLENSP
NFHVVTDNVSGVTAWGIKILSPSLVYTRPGYACPAGSTPDQRTPATCFTPETAKNTDGFD
PGQSRNVLLAYSYISTGDDNVAIKAHASAKSSNPSTDMAFVNNQFYYGHGMSFGSETDTG
IHRVQVQNLSIDGFNSNDAIKDPAATNGLRIKSDRTRGGQVSDITFENICMRNVARPLVF
DAFYSKPANADLGSAYPRFDNITLRNVHSLGSRDFGAGQLSFYGYRDAKQSYPITLALDN
VVLEGGAISFAAPHNGGPNANPAATHFRFTGGPVSFANLLVPSTQYDVQLQGQPGTGKPL
DCSAAFVTYSSVLADSPI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgcaagcgcgatgtcccgtctcaccctcgccctgccgctgctggcgatcgcc
tcgctgcatgccaacgcagccgtgcacccgcctctcgcccagcgcaaccaggccgccaac
gtcagtaccggctggggcacaatcgatcagccaacgctgccgcagaacgtgtgcatgaca
ctggcggcgacgctgcaaccgatcggcggttcgctcgacggcgtcgatgccgacccggcc
tactcggcgccggacacgctgcgcatccaggatgcgatcagcgactgccctgccggcagc
gcggtgcagctggtaaccggcgcccatggcgaatccggcttcctcagcggcccactgacc
ctcaagagcggcgtgacgctgtggatcgaccggggcgtcaccttgttcggctcgcgcaat
ccgcgcgactacgataacggcctgggcacctgcggcatcgccaacaccgacaagggcaaa
tcctgcaagccgctgatctacggcaacgcgatcagcaacagcggcgtggtcggcgacggc
aagatcgacggacgcggcggcagcgtgctgaccgcaggccccaacgccggcaagcgcagc
tggtgggacgtggcctaccagaacgtgagccaggggctggtgcagcacgcgccgcgcctg
ctgcagatcgacaacagcaaggatttcaccctgtatgcgctgaccctggagaattcgccc
aatttccatgtggtcaccgacaacgtcagcggcgtgaccgcctggggcatcaagatcctc
agcccgagcctggtctatacccggccaggctacgcttgcccggccggcagcacgccggac
cagcgcacgcccgccacctgcttcaccccggaaacggccaagaacaccgacggtttcgac
cccggccagtccaggaacgtgctgctggcgtattcctacatcagcaccggcgacgacaac
gtggccatcaaggcgcacgcgagcgccaaatccagcaatccgtccaccgacatggccttc
gtcaacaaccagttctactacggccatgggatgtccttcggcagcgaaaccgataccggc
atacaccgcgtccaggtgcagaacctgagcatcgacggcttcaacagcaatgacgcaatc
aaggaccccgccgccaccaacggcctgcgcatcaagtccgaccgcacccgcggcggtcag
gtctccgatatcaccttcgagaacatctgcatgcgcaacgtggcgcgcccgctggtgttc
gacgcgttctacagcaagccggccaatgccgatctcggcagcgcgtatccgcgtttcgac
aacatcacgctgcgcaacgtgcattcgctgggttcacgcgacttcggcgcaggccagttg
agtttctacggttaccgcgacgcgaagcagtcctatccgatcacgctcgcactggacaac
gtggtgctcgagggcggcgccatttccttcgccgcgccgcacaatggcgggccgaacgcc
aatccggcggccacccacttccgcttcaccggcggaccggtcagcttcgccaatctgctg
gtcccgtccacccagtacgacgtgcagttgcagggccagcccggaacaggcaagccgctg
gactgcagcgcggcattcgtcacctacagcagcgtactggccgattcgccgatctga
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