Xanthomonas graminis: KFS84_10075
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Entry
KFS84_10075 CDS
T10672
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xgm Xanthomonas graminis
Pathway
xgm03410
Base excision repair
xgm03430
Mismatch repair
xgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KFS84_10075 (recJ)
03430 Mismatch repair
KFS84_10075 (recJ)
03440 Homologous recombination
KFS84_10075 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgm03400
]
KFS84_10075 (recJ)
DNA repair and recombination proteins [BR:
xgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KFS84_10075 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KFS84_10075 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KFS84_10075 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
UKE55970
LinkDB
All DBs
Position
complement(2295159..2296889)
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AA seq
576 aa
AA seq
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MSPPLRITRRPAAEGGPWTESVLPLLRRIYTARGAHDASLAQPKLAQLLPPDALSGIDAA
VALLASAITDGKRILVVGDFDCDGATACAVAVRGLRLLGAAQVLHAVPNRMVHGYGLSPA
LVAELAPLQPDLLVTVDHGIACHAGVAAAKALGWQVLVTDHHLPGSVLPPADAIVDPNLA
GDAFPSKMLAGVGVIFYVLLALRRHLRERGAFATQAPDLSVLLDLVAVGTVADLVPLDTN
NRALVSAGLRRLQRGDGCVGLHALIEASGRDPARLSASDIGFALAPRLNAAGRLEDMALG
IELLLCEDPQQAREIAATLEQINGERRAVQQQMTDEAEATVAQALLAAPDAPPVAVCLFD
ADWHPGVIGLVASKMKDRLHRPVIAFAPAEPGSDQLRGSARSIPGFHIRDAMAAVEARRP
GLMDKFGGHAMAAGLSLPHAALAEFEQLFRAHALASLDAALLQAELLSDGALDPHELDHR
HAEALRLAGPWGQGFPEPLFDGEFEVLQWRLLKERHLKLSLRCAGRGEPLNAIHFNGWRG
DEPGPRVHIAYRLVADDYRGGEAVQLVVEHCQSLSG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgccgctgcgcatcacccggcggccggccgccgagggcgggccgtggacggag
agcgtgctgccgctgctgcgccgcatctacaccgcacgcggcgcgcacgacgccagcctg
gcgcagccaaagctggcgcagttgctgccgccggatgcgctgagcggtatcgacgcggcg
gtcgccttgttggcttcggcgatcactgacggcaaacgcatcctggtcgtcggcgatttc
gattgcgacggcgccaccgcctgcgcggtcgcggtgcgtggactgcgcctgctcggtgcc
gcgcaggtgctgcacgcggtgccgaaccgcatggtgcacggctacggcctgtcgccggca
ctggtcgccgaactggcgccgctgcagccggacctgctggtcaccgtcgatcacggcatc
gcctgccatgccggcgtcgccgcggccaaggcgctgggctggcaggtgctggtcaccgat
caccatctgccgggcagcgtgttgccgccggccgatgcgatcgttgatccgaacctggcc
ggcgacgcgttcccgagcaagatgctggccggcgtcggggtgatcttctacgtgctgctg
gcgttgcgccggcacctgcgcgagcgcggcgcgttcgccacccaggcgccggatctgagc
gtgctgctggatctggttgcggtcggcaccgtcgccgacctggtgccgctggacaccaac
aaccgcgcactggtctcggccggcctgcgccgcctgcagcgcggcgacggctgcgtcggc
ctgcacgccttgatcgaagccagcggccgcgatccggcgcggctcagcgccagcgacatc
ggtttcgcgctggcgccgcggctcaatgccgccggccggctcgaggacatggcgctgggc
atcgagctgctgctgtgtgaggacccgcagcaggcgcgcgagatcgccgccacgctggaa
cagatcaacggcgagcgccgcgcggtgcagcagcagatgaccgacgaggccgaggccacg
gtggcgcaagcgttgctggccgcgccggacgcgccgccggtggcggtgtgcctgttcgat
gccgactggcatccgggcgtgatcggcctggtcgcctcgaagatgaaggaccgcctgcac
cgcccggtgatcgccttcgccccggccgagccgggcagcgaccagttgcgcggctcggcg
cgctcgattcccggcttccacatccgcgacgcgatggccgcggtggaggcgcgccggccc
ggattgatggacaagttcggcggccatgcgatggctgctgggctgagcctgccgcacgcc
gcgttggccgagttcgaacagctgttccgcgcgcatgcgctggccagcctggacgcggcg
ctgctgcaggccgaactgctcagcgacggcgcgctggatccgcacgaactggatcatcgc
catgccgaggcgctgcgcctggccgggccatgggggcagggcttccccgagccgctgttc
gacggcgagttcgaggtgctgcagtggcgcctgctgaaggagcgccacctcaagctgagc
ctgcgctgcgccggccgcggcgagccgttgaacgcgatccatttcaacggttggcgcggc
gacgaacccggcccccgcgtgcacatcgcctaccgcttggtcgccgacgactatcgcggc
ggcgaggcggtgcaactggtggtggagcactgtcagagcctgtcgggctga
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