Xanthomonas graminis: KFS84_10685
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Entry
KFS84_10685 CDS
T10672
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
xgm Xanthomonas graminis
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xgm03009
]
KFS84_10685 (dbpA)
Enzymes [BR:
xgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KFS84_10685 (dbpA)
Ribosome biogenesis [BR:
xgm03009
]
Prokaryotic type
rRNA helicases
KFS84_10685 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
UKE52913
LinkDB
All DBs
Position
2418990..2420366
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AA seq
458 aa
AA seq
DB search
MNDFDTLSLSPALAPGIDALGYTTMTPVQAQSLPPILAGSDVIVQAPTGSGKTAAFGLGL
LHKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEGDRMLDMGFEEPIREIASRCDKHRQS
LLFSATFPDAIRTLARELLQEPVEITIEGADSAPEIEQQFFEVDPTYRQKAVAGLLLRFT
PESSVVFCNTRKEVDEVAGSLQQFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLAAVLNYELPTDTETYRHRIGRTARAGKRGLALSLVAPREVARAQALEAEQ
GQPLRWSRAPLATARPAQLPQAAMVTLRIDGGKTDKLRAGDILGALTGDAGLSGAAIGKI
AIYATRSYVAIAREHAGKALAQLQAGKIKGRRFRVVKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatttcgacaccctgtccctctccccggcgctggcgccgggcatcgacgcgctc
ggctacaccacgatgaccccggtgcaggcgcagagcctgccgccgatcctggccggcagc
gacgtcatcgtgcaggcgcccaccggcagcggcaagaccgccgcgttcggcctgggcctg
ctgcacaagctggacccggcactgacccgcgcgcaggcgctggtgctgtgcccgacccgc
gaactggccgaccaggtcggcaagcagctgcgcaagctggccaccggcattcccaacatg
aagctggtggtgctgaccggcggcatgccgctcggcccgcagctggcctcgctggaggcg
cacgacccgcaggtggtggtcggcacacccgggcgcatccaggaactggcccgcaagcgt
gcgctgcacctgggcggggtgcgcacgctggtgctggacgagggcgaccgcatgctcgac
atgggcttcgaggagccgatccgcgagatcgccagccgctgcgacaagcaccgccagagc
ctgctgttctcggccaccttccccgatgcgatccgcaccctggcgcgcgagctgctgcag
gaaccggtcgagatcaccatcgagggcgccgacagcgcgccggagatcgagcagcagttc
ttcgaagtcgaccccacctaccggcagaaggcggtggccggtctgctgctgcgcttcact
cccgaatccagcgtggtgttctgcaacacccgcaaggaggtcgatgaagtggccggctcg
ctgcagcagttcggcttctcggcgctggcgctgcatggcgacatggaacagcgcgaccgc
gacgaggtgctggtgcgcttcgtcaaccgcagctgcaacgtgctggtcgccagcgacgtg
gctgcgcgcgggctggacgtggaagacctggcggcggtactcaactacgaactgccgacc
gataccgagacctaccgccaccgcatcggccgcaccgcgcgcgccggcaagcgcggcctg
gcgctgagcctggtggcgccgcgcgaagtggcgcgcgcgcaggcgctggaggccgaacag
ggccagccgctgcgctggtcgcgcgcgccgctagctaccgcgcgcccggcgcagctgccg
caggcggcgatggtcacgctgcgcatcgacggcggcaagaccgacaagttgcgcgccggc
gacatcctcggcgcgctgaccggcgacgccgggctgtccggcgcagcgatcggcaagatc
gcgatctacgcgacccgctcctacgtcgccatcgcccgcgagcacgctggcaaggcgctg
gcgcaattgcaggccggtaagatcaaggggcgtcggttccgggtggtcaagctgtaa
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integrated database retrieval system
