Xanthomonas graminis: KFS84_13265
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Entry
KFS84_13265 CDS
T10672
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
xgm Xanthomonas graminis
Pathway
xgm02020
Two-component system
xgm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KFS84_13265
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KFS84_13265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgm03021
]
KFS84_13265
Transcription machinery [BR:
xgm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KFS84_13265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_IclR
Sigma70_r4
HTH_23
HTH_Crp_2
Sigma70_r4_2
HTH_11
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
UKE53318
LinkDB
All DBs
Position
2978059..2979507
Genome browser
AA seq
482 aa
AA seq
DB search
MKARLQTSLGQHLVMTPQLRQAIKLLQMSSAELEVEIAEAVESNPLLEWAEDAAPTLEVA
GAGRAEGEAEVAPPAGDTLDNVPQHDGDDWSDAEPAWSGGGGGSFDDDDDMGSAAERVAE
PDTLIDHLLWQLHLSHLSPRDRSIGAALIDALDDDGYLREPLAAIAETLQPDIVAEEEEI
GTVLHQIQRFDPVGIAARTLGECLNLQLDVLPADTPGLALARTIANGPLEKLPRSGIAGI
AHDLKRPASAVETAVNLLRSLDPRPGKQIGELSADTYVVPDCVVWRQRGVWHAALAGHAR
PKVTIHRGYEQLIRQCGESDAGYLRGQLQEARWLLKSLEARGETLLKVTRCLLRQQAGFL
EFGEQALRPLTLREIAGELGLHESTISRAIARKYVRTPRGTIPLRAFFASGIDTDSGGEA
SSTAIQAMLRRLIDAENPRKPLSDAKLAELLKGAGVPVARRTVAKYREAMNISASHERVR
IG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacggctgcagacatcgctgggacagcatctggtcatgacgccgcagttgcgg
caggcgatcaagctgttgcagatgtccagcgccgagctggaagtggagatcgccgaggcg
gtggagagcaatccgctgctggaatgggccgaagacgccgcgcccacgctcgaggtggcc
ggcgccggccgcgccgaaggcgaggccgaggtcgcgccgccggccggcgatacgctggac
aacgtgccgcagcacgacggcgacgactggtccgatgccgagccggcctggagcggcggc
ggcggcggctcgttcgatgacgacgacgacatgggcagcgccgccgagcgcgtcgccgaa
cccgatacgctgatcgatcacctgctgtggcagttgcacctgtcgcacctgtcgccgcgc
gaccgcagcatcggcgcggcgctgatcgacgcgctcgacgacgacggctacctgcgcgaa
ccgctggccgcgatcgccgagaccttgcagccggacatcgtcgccgaggaggaggaaatc
ggcaccgtgctgcaccagatccagcgcttcgacccggtgggcatcgccgcgcgcaccctg
ggcgaatgcctgaacctgcagttggacgtgctgccggcggacacgcccgggctggcgctg
gcgcgcaccatcgccaacggcccgctggagaagctgccgcgcagcggcatcgccggcatc
gcccacgacctcaagcgcccggcctcggcggtggagaccgcggtgaatctgctgcgctcg
ctggacccgcgcccgggcaagcagatcggcgaactcagcgccgacacctacgtggtgccc
gactgcgtggtgtggcgccagcgcggcgtctggcatgcggcactggccgggcacgcgcgg
cccaaggtcaccatccaccgcggctacgaacagctgatccgccaatgcggcgagagcgac
gccggctacctgcgcggccagctgcaggaagcgcgctggctgctgaagagcctggaggcg
cgcggcgaaaccctgctcaaggtgacccgctgcctgctgcgccagcaggccggcttcctc
gaatttggcgaacaggcgctgcgcccgctgaccctgcgcgagatcgccggcgaactgggc
ctgcacgagagcaccatctcccgcgcaatcgcccgcaaatacgtgcgcaccccgcgcggc
accatcccgctgcgtgccttcttcgcctcgggcatcgataccgacagcggcggcgaagcc
tccagcaccgccattcaggcgatgctgcggcgcctgatcgacgccgagaacccgcgcaag
ccgctttctgacgccaagctggccgagctgctgaaaggcgccggcgtgcctgtagcgcgg
cgcacggttgcgaagtatcgtgaggccatgaacatttccgcttcccacgaacgcgtccgc
atcggttga
DBGET
integrated database retrieval system
