Xanthomonas graminis: KFS84_15120
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Entry
KFS84_15120 CDS
T10672
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xgm Xanthomonas graminis
Pathway
xgm00300
Lysine biosynthesis
xgm00470
D-Amino acid metabolism
xgm01100
Metabolic pathways
xgm01110
Biosynthesis of secondary metabolites
xgm01120
Microbial metabolism in diverse environments
xgm01230
Biosynthesis of amino acids
Module
xgm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KFS84_15120
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KFS84_15120
Enzymes [BR:
xgm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KFS84_15120
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UKE53608
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Position
3398640..3399836
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AA seq
398 aa
AA seq
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MSLRIDPAPLASALAQLRERGDGPLCAYVYDLAALRRHATAMRTQLPADCELYYAAKANA
EPPLLRTLAPSVDGFEAASGGELQWLHQHQPGRPLLFGGPGKLDAELQLAVSLPACTLHV
ESLGELQRLARIAAQAGRRVPLFLRMNIAVPGMCDTRLMMGGRPSPFGLDALDLEAAMRL
LGDAPALQLAGFHFHLMSHQCDAQAQLRLVAGYLQTVQGWRQAYALGPLTVNAGGGFGVN
YADAAASFDWTGFCAGLPALLRAHGDGLRLRLEPGRYVSASCGWYLMEVLDIKRSHGEFF
AIGRGGTHHFRTPAAQGHDHPFLVLRGTQPPVLRDTRVTLVGQLCTPKDVLARAQPVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMLYVDAAG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgtatcgatccggcaccgctggcgagcgcgctggcgcagttgcgcgagcgc
ggcgacgggccgctgtgcgcctacgtctacgacctggccgcattgcgccgccacgccact
gccatgcgcacccagctgccagccgattgcgagctgtactacgcggccaaggccaatgcc
gagccgccgttgctgcgcacgctggcgccatcggtggacggtttcgaggccgcgtccggc
ggcgaactgcagtggctgcaccaacatcaaccgggccggcccctattgttcggcggaccc
ggcaagctcgacgccgaactgcagctggccgtgtcattgcccgcgtgcacgctgcacgtg
gagagcctgggcgaactacagcggctggcgcgcatcgccgcgcaagccgggcgccgcgtg
ccgctgttcctgcgcatgaacatcgccgtgcccggcatgtgcgacacgcgcctgatgatg
ggcgggcggccgtcgccgttcgggctggacgcactggacctggaggcggccatgcgcctg
ctgggcgacgccccggcgctgcaactggccggcttccacttccacctgatgtcgcaccag
tgcgacgcgcaggcgcagctgcgcctggtcgccggctacctgcagaccgtgcagggctgg
cgccaggcctacgcactgggtccgctgacggtgaacgccggtggcggcttcggcgtgaac
tacgccgatgcggcggcgtcgttcgactggaccgggttctgcgccggcctgccggcgctg
ctgcgcgcgcacggcgacggcctgcgcctgcgcctggagccgggccgctacgtcagcgcc
agctgcggctggtacctgatggaggtgctcgacatcaagcgcagccatggcgaatttttc
gccatcggccgcggcggcacgcatcacttccgcactccggccgcgcaaggccacgatcat
ccgttcctggtgctgcgcggcacgcaaccaccggtgctgcgcgacacgcgggtgaccctg
gtcggccagctgtgcacgcccaaggacgtgctggcgcgcgcgcaaccggtcgcggccctg
gcaccgggcgactgcctggcgttcccgctcgccggcgcctatgcatggaacatctcgcac
cagcagttcctgatgcacccgccgccgcagatgctgtacgtggacgctgcgggctag
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