Xanthomonas graminis: KFS84_17440
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Entry
KFS84_17440 CDS
T10672
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xgm Xanthomonas graminis
Pathway
xgm00521
Streptomycin biosynthesis
xgm00523
Polyketide sugar unit biosynthesis
xgm00541
Biosynthesis of various nucleotide sugars
xgm01100
Metabolic pathways
xgm01110
Biosynthesis of secondary metabolites
xgm01250
Biosynthesis of nucleotide sugars
Module
xgm_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KFS84_17440 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KFS84_17440 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KFS84_17440 (rfbC)
Enzymes [BR:
xgm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KFS84_17440 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
UKE53973
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Position
complement(3924128..3924685)
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AA seq
185 aa
AA seq
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MKVIETHLPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTNFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDIRRGSPQFGRWAAVVLSAENKKQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGVDWPISQPVLSAKDAVAPFLADIAPERL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtgattgaaacccatctgcccggctgcgtggtgatcgagccggcggtgttcggc
gacgaacgcggctatttcttcgagacctggaacgccgaacgtttcggccagcacgggctg
ccgaccaacttcgtgcagagcaacgtctcgacctcggccaagggcgtgttgcgcggcctg
cattaccaatggccgcgcccgcagggcaagctggtcagcgtgctggaaggcgaggtctac
gacgtcgccgtggacatccgccgtggctcgccgcagttcggtcgctgggcggcggtggtg
ctgagcgcggagaacaagaaacagttctggatcccggaaggtttcgcccatggcttcgcg
gtgctgtccgagcgtgcggtgttcagctatctgtgcaccgacgtgtacgtgaaggaagcc
gacgccggcgtgcgctgggacgacgcggcgatcggcgtggactggccgatcagccagccg
gtgctgtcggccaaggatgcggtggcgccgttcctggcagacatcgccccagaacgcctg
ccggtctatacgccgtga
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