Xanthomonas graminis: KFS84_18245
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Entry
KFS84_18245 CDS
T10672
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xgm Xanthomonas graminis
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgm03032
]
KFS84_18245
03400 DNA repair and recombination proteins [BR:
xgm03400
]
KFS84_18245
Enzymes [BR:
xgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KFS84_18245
DNA replication proteins [BR:
xgm03032
]
Prokaryotic type
DNA Topoisomerases
KFS84_18245
DNA repair and recombination proteins [BR:
xgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KFS84_18245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
PGM_PMM_IV
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UKE54087
LinkDB
All DBs
Position
4106431..4108917
Genome browser
AA seq
828 aa
AA seq
DB search
MSKHLLIVESPAKAKTINKYLGKDFHVLASYGHVRDLIPKEGAVDPDDGFAMRYALIEKN
EKHVEAIAKAAKVADDIYLATDPDREGEAISWHIAEILKERGLLKDKPLHRVVFTEITPR
AIKEAMANPRQIAVDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFVAREYWSIGADCLHPSQPFAAKLVKLDGQKFEQFTITDGDTAEAARMRLQK
AAQGALHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTSRTMRVAQKLYEGVTVGDE
GTVGLISYMRTDSVNLSQDALAEIRDVIARDFGTGALPDKPNMYQTKSKNAQEAHEAIRP
TAALRTPAQMAKYLDDDGRRLYELIWKRAVACQMVPATMNTVTVELAAGNEHSFRASGTT
VIDPGFLAVYEEGKDQKAAEDEDEGRKLPAMKPGDRIPLDRIHTDQHFTEPPPRFSEASL
VKTLEEYGIGRPSTYASIIQTLLFRKYVELDARRFRPSDVGRAVSKFLSGHFTRYVDYDF
TAKLEDELDAVSRGEEEWRPLMEKFWGPFKELVEEKKESVDRSEATGARELGTDPKTGKP
VSVRLGRFGPYAAIGSTAEDAEDKPKFASLRPGQSMHTITLEDALELFLMPRALGEDKGE
DVSVGIGRFGPFAKRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRIIKEYPGSDI
QVLNGRFGPYISDGKLNGKIPKDREPATLTLEEVQKLLEETGKPARRGFGAKKAAAKKEA
APKKSAAKKAAADAPAKPAAKKAVKKVAKKTAKKAAKKVVKKAAVKKA
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaacaaatac
ctcggcaaggacttccacgtcctggcctcgtatgggcacgtgcgcgacctgatcccgaaa
gaaggcgcggtggacccggacgacggcttcgccatgcgctacgcgctgatcgagaagaac
gagaagcacgtcgaggccatcgccaaggccgccaaggtcgccgacgacatctatctggcg
accgacccggatcgcgagggcgaggcgatcagctggcacatcgccgagatcctcaaggag
cgcgggctgctcaaggacaagccgctgcaccgggtggtgttcaccgaaatcaccccgcgc
gcgatcaaggaggcgatggccaacccgcggcagatcgccgtggacctggtcgatgcgcag
caggcgcggcgcgcgctggactacctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcgggctgtccgccggccgcgtgcagtcgccggcgctgcgcatgatcgtg
gagcgcgaggaagagatcgaagccttcgtcgcccgcgaatactggagcatcggcgccgac
tgcctgcacccctcgcagccgttcgcggccaagctggtcaagctcgacgggcagaagttc
gaacagttcaccatcaccgacggcgacaccgccgaagcggcgcggatgcgcctgcagaag
gccgcgcagggcgcgctgcacgtcaccgacgtggccagcaaggagcgcaagcgccgcccg
gcgccgccgttcaccacctccacgctgcagcaggaggcctcgcgcaagctcggcttcacc
accagccgcaccatgcgcgtggcgcagaagctgtacgaaggcgtgaccgtgggcgacgaa
ggcacggtcggcctgatcagctatatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctggccgagatccgcgacgtgatcgcgcgcgacttcggcaccggcgcgctgccggacaag
ccgaacatgtaccagaccaagtccaagaacgcgcaggaagcgcacgaagcgatccgtccg
accgcggcgctgcgcaccccggcgcagatggccaagtacctggacgacgacggccgccgc
ctgtacgagctgatctggaagcgcgcggtggcctgccagatggtgccggcgacgatgaac
accgtcaccgtggaactggccgccggcaacgagcacagcttccgcgccagcggcaccacg
gtgatcgacccgggcttcctggccgtgtacgaggaaggcaaggaccagaaggccgccgag
gacgaagacgaaggccgcaagctgccggcgatgaagcccggcgaccgcatcccgctcgac
cgcatccataccgaccagcatttcaccgagccgccgccgcgcttctcggaagcctcgctg
gtcaagacgctcgaggaatacggcatcggccgcccgtcgacctatgcctcgatcatccag
accctgctgttccgcaagtacgtggaactggacgcgcgccgcttccgtccgtcggacgtg
ggccgcgcggtcagcaagttcctgtccggccacttcacccgctacgtcgactacgacttc
accgccaagctcgaggacgagctggacgcggtgtcgcgcggcgaggaggaatggcggccg
ctgatggagaagttctggggcccgttcaaggaactggtcgaggagaagaaggaatcggtg
gaccgctccgaggccaccggcgcgcgcgaactcggcaccgaccccaagaccggcaagccg
gtcagcgtgcgcctgggccggttcgggccgtatgcggcgatcggcagcaccgccgaggac
gccgaggacaagcccaagttcgcctcgctgcggccgggccagagcatgcacaccatcacc
ctggaagacgcgctggagctgttcctgatgccgcgcgcgctgggcgaggacaagggcgag
gacgtcagcgtcggcatcggccgcttcggcccgttcgccaagcgcggcagcgtctatgcc
tcgctgaagaaggaagacgatccgtacaccatcgacctcgcgcgggcggtgttcctgatc
gaagagaaggaagagatcgcgcgcaaccgcatcatcaaggaataccccggcagcgacatc
caggtgctcaacggccgcttcggcccgtacatcagcgacggcaagctcaacggcaagatc
cccaaggaccgcgagccggccacgctgaccctggaagaagtgcagaagctgctggaagag
accggcaagccggcacggcgcggcttcggcgcgaagaaggccgcagcgaagaaggaagcg
gcgccgaagaagagcgcggccaagaaggccgcggccgacgccccggccaagcccgcggcg
aagaaggcggtcaagaaggtagcgaagaagaccgcgaagaaagccgccaagaaagtggtc
aagaaggccgcggtcaagaaggcctga
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integrated database retrieval system
