Xanthomonas graminis: KFS84_18775
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Entry
KFS84_18775 CDS
T10672
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xgm Xanthomonas graminis
Pathway
xgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KFS84_18775 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgm03400
]
KFS84_18775 (recD)
Enzymes [BR:
xgm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KFS84_18775 (recD)
DNA repair and recombination proteins [BR:
xgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KFS84_18775 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
Helicase_RecD
AAA_22
UvrD_C
T2SSE
DEAD
AAA_16
nSTAND3
Herpes_Helicase
AAA_28
SLFN-g3_helicase
ATPase
Rad17
Motif
Other DBs
NCBI-ProteinID:
UKE54156
LinkDB
All DBs
Position
complement(4221897..4223900)
Genome browser
AA seq
667 aa
AA seq
DB search
MNQPNLLAALHRSGTLRTLDHAFAQTLSRLDPDTPDLVLAGAALASLAVASGHAGLDPAH
ANVLLDPRDGPPPQLPDPTDWQRVLAASRWIAQPAPEEPAAADCPLVLEHGLLYLRRYRE
YERRLAQGLRRLAAQSLPPFDVAALAPLFAKLFPLPSATEGSPRGREGARRAGEGTSAAD
HPTDRQAQAAALALRRALLLVTGGPGTGKTTTIARLLLLRIAQAQATGGAAPRIALAAPT
GRAAERMAESLRVAVTRALDHGIDPALAAALPAGASTLHRLLGVIPNLPRFRFDADNPLP
FDLIVVDEASMVDLPLMCKLVEAVADGTQLILLGDADQLPSVEAGDVLAAILQAAGPGDA
LQPDDAQALQPLLGHTRSDTHRGGLAGHRVHLLRGYRQAHGFALAPLADAVRTGDADTAL
ALLRSGELAGVHFHEDSEDPLATRRDALLAHWRALADADDPAAALCDAARLRLLTAVRVG
AHGARGLNARIEHLLADSGAGARRLGAASPWFHGRLLLITENSYRHGLFNGDVGICLRDA
QGALVAWFEAEGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDDVWLQLPTRDARVLSR
ELVYTGITRARRTLHLAASEAVLRGALARHAARISGLAWRLGGKQEAAPATQAVETFTDT
PVQGALF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccaacccaacctcctggccgccctccaccgcagcggcaccctgcgcacgctcgac
cacgccttcgcgcaaaccctgagccgcctggacccggacacccccgacctggtgctagcc
ggcgccgcccttgcttccctggcagtcgccagcggccacgccggcctggacccagcccac
gccaacgtcctgctggacccacgcgatggcccgccgccgcaactcccggaccccaccgac
tggcaacgcgtcctggccgcctcgcgctggatcgcccagcccgcgcctgaagaaccggcg
gccgccgactgcccgctggtactggaacacggcctgctctacctgcgccgctaccgcgaa
tacgagcgccgcctggcgcaaggcctgcgccgcctcgccgcgcaatcgctgccgcccttc
gacgtcgccgcactggcaccgctgttcgcgaagttgttccctctcccatcggcgaccgaa
ggaagcccccgtgggagagagggtgcccgaagggcgggtgagggtacgtccgccgccgac
caccccacagaccgccaagcccaagccgccgcactcgccctgcgccgtgccctgctgctg
gtcaccggcggccccggcaccggcaagaccaccaccatcgcgcgcctgctgctgctgcgc
atcgcccaggcgcaggccacgggcggcgccgccccgcgcatcgccctggccgcccccacc
ggccgcgccgccgaacgcatggccgagagcctgcgcgtggcggtgacacgcgcgctcgac
cacggcatcgacccggccctggccgccgcattacccgccggcgccagcaccctgcaccgc
ctgctcggcgtcatccccaacctgccgcgcttccgctttgatgccgacaacccgctgccg
ttcgacctgatcgtggtcgatgaagcctcgatggtcgacctgccgctgatgtgcaaactg
gtcgaagccgtcgccgacggcacccagctgatcctgctcggcgacgccgaccagctgccc
tcggtcgaagccggcgacgtcctcgccgcgatcctgcaggcggccggtcccggcgacgcc
ctgcagccggacgacgcgcaagcgctgcagccgctgctcggccacacccgcagcgacacg
caccgcggcggactcgccggccaccgcgtgcacctgctgcgcggctaccgccaggcgcac
ggcttcgccctggccccgctggccgacgccgtacgcaccggcgacgccgacaccgccctg
gccctgctgcgcagcggcgagctggccggcgtgcacttccacgaagacagcgaggacccg
ctcgccacccgccgcgacgccctgctcgcgcactggcgcgccctggccgacgccgacgat
cccgccgcggccctgtgcgacgccgcgcgcctgcgcctgctcaccgccgtgcgcgtcggc
gcgcacggcgcgcgcggcctcaacgcccgcatcgaacacctgctggccgacagcggcgcc
ggcgcacgccgcctcggcgccgcctcgccctggttccacggccgcctgctgctgatcacc
gaaaacagctaccgccacggcctgttcaacggcgacgtcggcatttgtttgagggatgcg
caaggcgcgctggtggcctggttcgaagccgagggcgacggccaggtccgcggcttccac
cccgccgcgttgcccgcccacgaaagcgccttcgccatgaccgtgcacaaggcgcaaggc
agcgagttcgacgacgtctggctgcaactgcccacccgcgacgcgcgcgtgctcagccgc
gaactggtctacaccggcatcacccgcgcgcggcgcacgttgcatctggccgccagcgaa
gccgtgttgcgtggcgcgctggcaaggcatgccgcgcggatctcgggattggcgtggcgc
ttgggtgggaagcaagaggcggcacccgccacgcaagcggtggaaacattcacggacacg
cccgtgcagggtgcgttgttctga
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