Xenorhabdus griffiniae: QL128_01535
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Entry
QL128_01535 CDS
T09400
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03030
DNA replication
xgr03410
Base excision repair
xgr03420
Nucleotide excision repair
xgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QL128_01535 (polA)
03410 Base excision repair
QL128_01535 (polA)
03420 Nucleotide excision repair
QL128_01535 (polA)
03440 Homologous recombination
QL128_01535 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgr03032
]
QL128_01535 (polA)
03400 DNA repair and recombination proteins [BR:
xgr03400
]
QL128_01535 (polA)
Enzymes [BR:
xgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QL128_01535 (polA)
DNA replication proteins [BR:
xgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
QL128_01535 (polA)
DNA repair and recombination proteins [BR:
xgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
QL128_01535 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QL128_01535 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WMV72777
LinkDB
All DBs
Position
334353..337145
Genome browser
AA seq
930 aa
AA seq
DB search
MAQIADNPLILVDGSSYLYRAYHAFPPLTNSSGEPTGAMYGVLNMLRSLVIQYKPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRLQIEPLHKMVNAMGLPILVVPGVEADDVIGT
LALQAEKEGRSVLISTGDKDMAQLVTPNITLINTMTNTILGPEEVEGKYGIPPELMIDFL
ALMGDSSDNIPGVPGVGEKTALGLLQGIGGLDEIYTRLDEIATLGFRGAKTLGGKMEQYK
EVAYLSYQLATIKTDVELDKTCLELSVMPPDTEALLALFSHYEFKRWISDVQNGSWLEGN
GKKPASANAKSEPVAVAPAGAKISPENYQTILERQSLDQWIEKLKQAPAFSFDTETDSLD
TLTANLVGMSFAIAVGESEVEAAYLPLGHDYLDAPQQLDLHEVLTALKPLLEDANLPKIG
QNLKFDRGVLARYDIALNGIVFDTMLESYVLNSVAGRHDMDSLADRHLGYKTTTFEEIAG
KGKKQLTFNQIPLEEAAKYAAEDADVTLRLHQVMYPQLENAPTLQKVFQKIEMPLVPVLS
RMERTGVLINAQTLAEHSREITARLDELEKSAYELAGEEFNLASPKQLQVILFEKMNLPV
LKKTPNGAPSTNEEVLEELAEHHELARVILEHRGLAKLKTTYTDKLPQMVHPLTNRVHTS
YHQAVTATGRLSSRDPNLQNIPVRNGEGRRIRQAFIAPEGYRIMAADYSQIELRIMAHLS
QDKGLLEAFAQGKDIHRATAAEVFGVPLEQVTSEQRRSAKAINFGLIYGMSSFGLSRQLG
IPRGEAQRYMDLYFERYPGVLTYMERTRAQAADHGFVETLEGRRLYLPDIKSRNAMRRKA
SEREAINAPMQGTAADIIKLAMIAVDNWIVSEQPNVRMIMQVHDELVFEVHESELETAGQ
KIRELMEQSMQLDVPLKVDVGIGENWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcacagatagcagacaatcccctgattttggttgatggttcttcatacctttatcgt
gcataccatgcgtttccaccactgacaaacagttcaggagaaccgacgggcgccatgtat
ggtgtactgaacatgttacgaagtttggttattcagtataaacccagccatgtggcggtt
gtgtttgatgccaaaggcaaaacgttccgtgatgagctatttgctgaatataaatcccat
cgaccaccaatgccggatgatttgcgtttacagattgaaccgttgcataaaatggttaat
gcgatgggactgccaattctggttgtgccgggggttgaagctgacgatgttatcggtaca
ttggctttgcaagctgaaaaagagggccgttcggtgctgattagcacaggtgataaagat
atggcgcaattggtgacgccaaatatcacgctgattaacaccatgactaacactatcttg
gggccagaagaggtggaggggaaatatggtatcccgcctgaattgatgatcgattttctc
gctctcatgggagattcttccgataatattccaggggtgccgggagtgggtgaaaaaacc
gctctggggctattgcagggtattggcggattggatgagatctatacccgtcttgatgaa
attgccacacttggtttccgtggagctaaaactctgggtggtaaaatggaacaatataaa
gaggtggcttatctttcctaccaattggcgacaatcaaaactgacgttgagctggataag
acctgtttagagctttctgttatgccaccggatacggaggcgttactggcactgtttagt
cattatgaattcaaacgttggatcagtgacgtacagaatggcagttggctggaaggcaat
gggaaaaaacctgcctcagccaacgctaagtcagaaccagtggctgttgcaccagctggc
gctaaaatttcaccggaaaattatcaaaccatccttgaacgccaatcccttgatcagtgg
attgaaaaactgaaacaggcaccggcgttctcttttgatactgaaaccgacagtcttgac
accttaacagctaacctggtggggatgtcctttgccattgccgtgggggaatcagaagtt
gaagccgcttatctgccattgggacacgattatctggatgcgccccagcaattggatctg
catgaagttctcacagcattaaaaccgctgctggaggacgctaatctgcctaaaattggt
caaaacctgaaatttgatcgtggggttttggcacgttatgacattgctttaaatggcatt
gttttcgataccatgctggaatcgtatgttttgaacagcgtcgcagggcggcatgatatg
gatagccttgctgatcgtcatctgggttataaaaccaccacatttgaagaaattgccggc
aagggtaaaaagcaactcaccttcaatcaaattccattggaggaagccgcaaaatatgca
gcggaagatgcggatgtgactcttaggctacatcaggtcatgtaccctcagctagaaaat
gcgccaactctgcaaaaagttttccagaagatcgaaatgccgctggtgccggtgctatcc
cgtatggaaagaacaggggtgttgatcaacgcccaaacattggcagaacattcaagggaa
atcactgcgcgtttggatgaactggaaaaatccgcttacgagttggcaggggaagaattc
aatctggcgtcaccaaaacaactacaagtcatcttatttgaaaaaatgaacttgcctgtc
ttgaaaaagacgccaaatggcgcaccttcaacaaatgaagaagtgctggaagagttggca
gaacaccatgaattggcaagggtgattttggaacatcgtggcctggcaaaattgaaaacc
acttatactgataaattgcctcagatggtgcacccactgacgaatcgagttcatacctct
tatcatcaggcggtaacggcgacgggacgtctctcttctcgtgatccaaatttgcaaaac
atccctgttcgcaatggtgaagggcgccgcatccgtcaggcatttattgccccagaaggt
tatcgcattatggcggcggactattcacaaattgaattgcgcattatggcgcatttgtca
caggacaaaggtctgttggaagcatttgcccaaggtaaggacatccaccgtgcgacggct
gcggaagtgtttggtgttccattggaacaagtgactagcgagcagcgtcgcagtgctaaa
gcgattaactttggcctgatttacggtatgagttcgtttggtctatcccgccagttaggt
attccgcgtggtgaagcacagcgctatatggatctctattttgaacgttatccaggggtg
ttgacttatatggagcgtacacgggcgcaggcggctgatcatggatttgtcgaaacgctg
gaaggccgtcggttatacctgccggatatcaaatcgcgtaatgctatgcgccgcaaggcg
tcagagcgtgaagctatcaatgcaccgatgcagggaacggcagcggatatcatcaaattg
gcaatgattgcagtagataactggattgtcagtgaacagccaaatgtgcgtatgatcatg
caggttcacgatgaattggtatttgaagtccatgaatcagagctggagaccgcagggcag
aaaatcagggagttgatggaacaaagtatgcagcttgatgtgccgttaaaagtggatgtt
gggattggtgaaaattgggatcaggcacactga
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