Xenorhabdus griffiniae: QL128_02380
Help
Entry
QL128_02380 CDS
T09400
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr02020
Two-component system
xgr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QL128_02380 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QL128_02380 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgr03021
]
QL128_02380 (rpoN)
Transcription machinery [BR:
xgr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QL128_02380 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WMV72926
LinkDB
All DBs
Position
complement(538551..539990)
Genome browser
AA seq
479 aa
AA seq
DB search
MKQSLQLRLSQQLTMTPQLQQAIRLLQLSTLELQQEIQQALETNPLLEQDDLHQEVENQA
LSDADTEVMDTREALEQRDMPEELPLDASWDEIYTAGTPSGTHSDYSVDDFPVYQGETTQ
TLQDYLMWQAGLTPFTETDAAIATSIIDAIDDTGYLTISTEEILTSIGDDELTLAEVETV
LKRIQHFDPIGVAARDLRECLLIQLAMLPPKTPYLNDAKLIVSNYLALLGNRDFRNLLRQ
SKLKESTLKGAIDIIQSLEPKPGLVVNTGESEYVIPDVLAQRENGRWQVRLNTDSIPRLR
INQHYAALGQRANNESDSLFIRNNLQEAKWLLKSLESRNETLLKVARCIVERQQDFFEYG
EEHMKPLVLADIAYQIDMHESTISRVTTQKYLYSPRGIFELKYFFSSHVNTDSGGEASST
AIRALVKKLVAAENPAKPLSDSKLTSILAEQGIQVARRTVAKYRESLSIPPSNQRKKLV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaagtttgcaactcaggctcagtcagcaattgacgatgacgccacaactccag
caagccatccgtttgttgcaactatctacgcttgagcttcagcaagagatccagcaagca
ttggaaaccaacccactgcttgagcaagatgatctgcatcaggaagtggagaaccaggcc
ctttctgatgccgatactgaagtcatggatacccgtgaagcacttgaacagagggatatg
cctgaagagctaccgttagatgccagttgggatgaaatttacaccgctggcacgccttca
ggaactcacagtgattatagcgttgatgatttccccgtatatcagggagaaaccacccaa
actttgcaagattacctcatgtggcaggcaggattaacgccatttaccgaaacggacgct
gccattgccacttcaatcattgacgccattgatgacaccggatatctgaccatttctacc
gaagagatccttaccagtattggtgatgatgaactgactttggcagaggtcgaaaccgtt
ctcaaacgcatacaacattttgatccgatcggcgttgctgcccgtgacttacgcgaatgc
ttgcttatccagcttgcaatgctgccgccaaagacgccctatctgaatgatgccaaactt
attgtcagcaactacctggcactactgggtaatcgagacttccgtaatttattacgtcag
agcaaattaaaagagagtaccctgaagggggcaattgatatcatccaatcactggaacca
aaacctggcctggtagtcaatactggtgaatccgaatatgttattccagatgtattggca
cagagagaaaatggacgctggcaagtcaggctaaataccgatagcatcccccgtctgcgc
atcaaccaacactacgcagcactgggacaacgggccaacaatgagagtgacagcctgttc
atacgcaataacttgcaagaggccaaatggctgctcaagagcctcgaaagccgtaatgaa
acattgctgaaagtcgcccgctgtattgttgaacggcaacaagacttttttgaatatggt
gaggaacacatgaaaccactggtattggctgatatcgcctatcagattgacatgcatgag
tccaccatttctcgcgtgacaacccagaaatacctgtatagcccacgagggatttttgaa
cttaagtattttttctccagtcacgtcaacaccgacagtggtggtgaagcttcttctacc
gcgatacgtgcgctggtgaaaaaactggtcgcggcagagaatccggctaagccactgagt
gacagtaaattgaccagcatactcgctgagcaaggtattcaagtggctcgccggactgtc
gcaaaatatagagagtcgttatccatcccgccttcaaaccaacgtaagaaattggtttga
DBGET
integrated database retrieval system