Xenorhabdus griffiniae: QL128_03255
Help
Entry
QL128_03255 CDS
T09400
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03030
DNA replication
xgr03430
Mismatch repair
xgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QL128_03255 (dnaE)
03430 Mismatch repair
QL128_03255 (dnaE)
03440 Homologous recombination
QL128_03255 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgr03032
]
QL128_03255 (dnaE)
03400 DNA repair and recombination proteins [BR:
xgr03400
]
QL128_03255 (dnaE)
Enzymes [BR:
xgr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QL128_03255 (dnaE)
DNA replication proteins [BR:
xgr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QL128_03255 (dnaE)
DNA repair and recombination proteins [BR:
xgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QL128_03255 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WMV73084
LinkDB
All DBs
Position
720421..723903
Genome browser
AA seq
1160 aa
AA seq
DB search
MTEPRFIHLRVHSDYSMIDGLAKIGPLVKKIAKLGMPAFAITDFTNLCGLVKFYGNAHGA
GIKPIIGADFYVESDLLGDEYAHLTILARNNEGYKNLTLLISQAYQKGYGAIGPTIQREW
LVKYKTGLILLSGGRMGDVGKFLLRGNRAMAEQCLDFYQEHFPDSYYLELIRTGRQDEEN
YLHAAVALASEKNLPVVATNDVCFLESEDFEAHEIRVAIHDGYTLSDPKRPKNYSPQQYL
RSEQEMCELFSDIPEALQNSVEIAKRCNVTIRLGEYFLPQFPTGEMSTEDFLIEKSRQGL
EERLEFLYPDPEARAQKRPEYDERLAVELNVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERISMPDFDIDFCMEKRDQVIDHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPSDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPIYCDPEGQNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMVNARRARKELEPIDIAAIPLDDQKSFDML
QRSETTAVFQLESRGMKDLIKRLRPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAIKQGVDGTLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAMLEARQKGGHFKELFDLCARVDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
SLEGALKAADQHAKAEATGQTDMFGVLAEEPEQVERSYASTPKWPDQVVLDGERETLGLY
LTGHPITGYLKEIERYTNGLRLKDVNPTPRGQVTTVVGLVLASKIVTTKRGNRIGISTLD
DRSGRLEIMLFSDALERYQHLLEQDKILIATGQVSFDDFSGGLKMTVRELMDISEAREKF
ARGLAISLSDRQIDEQLLSRLRGALEPHRSGTIPVHLYYQRVDARARLRFGATWRVTPTD
TLLTDLRTLLGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaccacgttttatacacttacgtgttcacagtgattattcaatgattgatggc
ttggcgaagatcggcccattggtgaaaaaaatcgccaaattgggaatgccagcttttgcg
atcacggattttaccaacttatgtggattggtgaaattctatggcaatgcccacggtgcc
ggcatcaagccaattattggtgcagatttttatgtggaaagtgatttgttgggagatgaa
tatgctcacctgacgatccttgcccgtaataatgaaggttacaaaaatctgactctgcta
atctctcaagcttaccaaaaaggttatggcgcgattggcccaactatccagcgggaatgg
ctggtgaaatacaaaacagggttgatcttgctgtcgggtgggcgcatgggggatgtgggt
aaattcctgctgcgtggcaatcgtgcgatggcggaacaatgcctcgatttttatcaggag
cattttcctgacagctattaccttgagttgatccgtaccggacgtcaggatgaagaaaac
tatcttcatgcagctgtggcactcgcgtcagaaaaaaatcttcctgttgtggcaaccaat
gacgtttgttttcttgaaagcgaagactttgaagcccacgagattcgggttgctatccac
gatgggtatacgctgtctgatccgaaacgtcctaaaaattacagccctcagcaatatcta
cgcagtgaacaggagatgtgtgagcttttctcagacattcctgaagcgctacaaaatagc
gtagaaattgctaaacgctgtaatgtcacgatccgtcttggtgagtatttcctgccgcaa
tttccgacgggggaaatgagcactgaagatttcctcattgaaaaatccaggcaagggttg
gaagagcgtctggaatttctctaccccgatccggaagccagggcgcaaaaacggccagaa
tatgatgaacgtcttgctgttgagctgaacgttatcaatcaaatgggattcccaggttac
ttcctgatcgtaatggaatttatccagtggtcgaaagacaacggtgttcccgttggacca
gggcgaggttctggtgccggctcccttgtggcttatgcgttgaaaattaccgacctcgat
ccgctggaattcgatctgctgtttgaacgtttcctcaaccctgaacgtatttccatgcca
gattttgacatcgatttctgtatggaaaaacgcgatcaagttattgatcacgttgcagat
atgtacggacgagatgcggtatcgcagatcatcacttttggtacgatggcggcgaaagcg
gttatccgcgatgttgggcgtgtacttgggcacccctatggatttgtggaccgaatctcg
aaactggtgccttctgatccggggatgacgctggaaaaagcgtttgccgccgagccacag
ctacctgaaatttacgaagcagatgaagaggttaaagcgctgatagacatggcgcgcaaa
ctggaaggtgtcactcgtaacgcaggtaaacatgccggtggtgttgttattgcaccaact
aaaattactgattttgcgccgatttactgtgatccagaagggcaaaacccggttacccag
tttgacaaaaacgatgtggaatacgcaggcctggttaagtttgacttcctgggcttgaga
accctgaccatcatcaactgggcacttgagatggtgaatgctcgtcgtgccaggaaagag
ctggagccgattgatatcgctgctattccgttggatgatcagaaaagtttcgatatgctg
caacgttctgaaaccacggccgtgttccagcttgaatcgcgcggaatgaaggacttaatc
aaacgcctgcgccctgactgttttgaagacatgatcgcattggtggccctgttccgtccc
gggccgttgcaatcaggcatggtagataactttatcgaccgtaaacatggacgggaagag
ctttcttatcctgatgttgaatggcaacacgaatccttaaaacctgtattggagccaact
tacggcattatcctgtatcaggaacaggtgatgcagattgcacaggttttggccggttat
accttgggcggggcagatatgttgcgccgtgcaatgggtaagaaaaaaccagaggagatg
gctaaacagcggtcggtatttgaagagggagcgataaaacagggcgttgatggtacgctt
gcgatgaaaatcttcgatttggtggagaaattcgcgggttatggctttaacaaatctcac
tccgcagcttatgcactggtttcttaccaaacgttgtggttgaaagcacactatccggca
gaatttatggctgccgtgatgacggcagatatggataacaccgaaaaagtcgttgggttg
gtggacgagtgctggcgtatggggttgaaagttcttcctcctgatattaacagcggtttg
tatcatttccatgtcaatgatgatggagaaattgtttacggcattggtgcgattaaaggt
gtgggtgaaggaccgatcgaagcgatgctcgaagcccgacagaaaggggggcatttcaaa
gagctatttgacctatgcgcacgtgttgataccaaaaaaataaaccgtcgggtgatggaa
aaactgatcatgtctggtgcttttgatcggttgggaccacatcgtgcggcactgatgtct
tccctggaaggggcactgaaagcagcggatcaacatgccaaagccgaagccacggggcaa
accgatatgtttggcgtgttggctgaagaaccagaacaagttgagcgctcctatgccagc
accccaaaatggccagatcaggtggtattggatggtgagcgggaaacgttgggactgtac
ttaactgggcatccaattacaggttatttgaaagagattgaacgatataccaatggatta
cgtctaaaagatgtgaacccgacacctcgtggccaggtaacaactgtggtaggtttggta
ttagcttccaaaatagtgacaaccaaacggggaaaccgaattggtatcagtacattggat
gatcgttcaggacgtctggagatcatgctgttttctgatgcactggaaaggtatcagcat
ttattagagcaggacaagattttgattgctaccggacaagtcagctttgatgacttcagc
ggtgggcttaaaatgacagttcgtgaattaatggatatcagtgaggcacgtgaaaaattt
gcacgtgggcttgctatctcgttatcggacaggcaaattgatgaacaattattgagccgt
cttcgtggagcattggagccacaccgttcaggtacaataccggttcatctttattaccag
cgggtagatgcccgcgcccgtttacgattcggggcgacatggcgggtaacgccaacagac
acccttttgaccgatctgcgaactctgctgggtaatgagcaggtagaattagaatttgac
tag
DBGET
integrated database retrieval system
