Xenorhabdus griffiniae: QL128_04760
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Entry
QL128_04760 CDS
T09400
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03410
Base excision repair
xgr03430
Mismatch repair
xgr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QL128_04760 (recJ)
03430 Mismatch repair
QL128_04760 (recJ)
03440 Homologous recombination
QL128_04760 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgr03400
]
QL128_04760 (recJ)
DNA repair and recombination proteins [BR:
xgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QL128_04760 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QL128_04760 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QL128_04760 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WMV73350
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All DBs
Position
1061548..1063281
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AA seq
577 aa
AA seq
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MSREIQLRRRPVADLDHLPNDIHPLLRRLYAMRGIQQVGELERSAKGLLNYQSLNGIEQA
VALLVTALHEHWRVVIVGDFDADGATSTALSIRALRAMGYRNLDYLVPNRFEDGYGLSTQ
VVDEVVKRSADLIITVDNGISSHDGVAVAHQHGIKVIVTDHHLPGETLPAADAIINPNLV
DCTFPSKALAGVGVAFYLMSALRAELRKLAWFEQQGIPLPNLAELLDLVALGTVADVVPL
DTNNRILVYQGLNRIRAGRCCAGIRALLEVSKREATKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLTDDMAQARQIACELDGLNQTRREIEQGMQQEALQICDKIERTHTQLPYGLAI
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSVNGLHMRDALERLDTLHP
GLMLKFGGHAMAAGLSIEQDKFDLFQRYFSELVADWMDIAQLEGVIWSDGELALAELSLE
VAEILRDGGPWGQAFAEPVFDGKFKLLQQRIVGEKHLKVMLEPLNGGPMLDGIAFNIDVS
CWPDNSIKTVELAYKLDINEFRGNRDVQLLIQHIWPY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagagaaatacaactccgccgccgaccggtggcggaccttgatcatcttcccaac
gatatccatccgttattgcgccgtttatatgctatgcgtggcatacagcaagttggtgaa
ctggagcgtagtgcaaagggactcctcaattatcaatccctcaatggtattgagcaggct
gttgccttattggttactgcattacatgaacattggcgtgtcgtgatagttggcgatttt
gatgcggatggagcaaccagtactgctttgagcatccgcgctttgcgtgccatgggatat
cgcaaccttgattatcttgtgccaaaccgttttgaagatggttatggattaagcactcag
gtggttgatgaagttgtcaaaagaagcgcagatctgattatcaccgtggataatgggatc
tcatcccatgatggtgtagccgtggcacatcaacatggcatcaaggtgatcgtcacagat
caccatttaccgggcgaaacattgccagccgcagatgccattatcaatcctaatttagtt
gactgtacttttccttctaaggcattggcaggggttggtgttgcattttatctgatgtct
gcactcagggctgaattgcgcaaactggcatggtttgagcaacaaggtattccattaccc
aatttggcggagctgctggatttagtggcattaggtacagtggctgacgtggttcccctc
gataccaataatcgcattctggtatatcaaggactcaatcgcattcgggcagggcgttgc
tgtgcgggaatacgggcgctgctcgaagtttccaaacgggaagcgacaaaattggccgcc
agtgatttgggatttgcgttggggccacgcttaaatgccgccggacgtctggatgatatg
tccgttggggtggcattattactgactgatgacatggcgcaagcccgccagattgcttgc
gagttggatggtctgaaccaaacccgtcgggaaatcgaacaaggtatgcagcaggaagcc
ttgcagatttgcgataaaatcgaacgaacccatacccagctaccttacggattagccatt
taccatcccgaatggcatcagggggttgtgggtattttggcatcacgtattaaagagcgt
tttcatcgcccagtcattgcttttgctccggcaggtgatggcactttgaaaggctctggg
cgttccgtaaatggcttacatatgcgagatgcacttgaacgtcttgatactctgcatcca
ggactgatgttgaaatttggtggtcatgcgatggcagcgggattgtcgattgaacaagac
aaatttgatctttttcagcgctatttttccgaactggtcgctgattggatggatatagcc
caacttgaaggtgtgatctggagcgacggcgaattagcattggcagagttatcgttggaa
gtggctgaaattctgcgtgatggtggtccgtgggggcaagcatttgcggaaccggttttt
gacggtaaattcaaactattgcaacagcgtattgtgggtgaaaagcacctgaaagtcatg
ctggaacccttaaatggtgggccaatgttagatggcattgcatttaatattgatgtcagt
tgctggccggataatagtatcaaaacagtagaattggcctataaactggatattaacgaa
tttcgtggtaatcgcgatgttcagcttttgatccagcatatttggccctattga
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