Xenorhabdus griffiniae: QL128_08100
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Entry
QL128_08100 CDS
T09400
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
QL128_08100 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xgr03400
]
QL128_08100 (xseA)
Enzymes [BR:
xgr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
QL128_08100 (xseA)
DNA repair and recombination proteins [BR:
xgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
QL128_08100 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Arc_MA
HAS-barrel
Motif
Other DBs
NCBI-ProteinID:
WMV73945
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All DBs
Position
complement(1748456..1749823)
Genome browser
AA seq
455 aa
AA seq
DB search
MSLPINTGIFSVSRLNQTVRQLLELEMGRIWLSAEISNFSQPSSGHWYFTLKDERAQVRA
AMFRSHNLRATFRPQNGQQVLVRAQITLYEPRGDYQLIVESIQPAGDGLLQQQFEMLKQK
LSTEGLFDQIHKKSLPSPAKRLGVITSSSGAALHDILHILKRRDPSLPIVIYPTAVQGAE
APLQIIRAIELANARQECDVLIVGRGGGSLEDLWCFNDEQVARAIFQSHIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQIELLRQIQSLQQRLEMAMDYFFAQKQQRVNVLQ
HRLLQQRPDLQLARQQNHLAELRQKLIDRFLRCLKQRSVSYEKLNQRLLQIHPEREIQRY
SQSIQQFDFRLKQSIERQLGRYREKFAISCSRMEAVSPLATLSRGYSISEAPDGKLLRQV
KQVKAGDMLKTRLQDGWIDSQVTQVTKANKRKKLK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaccaatcaataccggaattttttccgttagccgtttaaaccagactgttcgt
cagttgcttgagctggaaatgggcagaatttggttatccgccgaaatatccaatttttct
cagccatcgtcagggcattggtacttcacattaaaagatgagcgagcacaggttcgtgcg
gccatgtttcgcagccacaatttgagggcaacctttcgtccacaaaatggtcagcaggta
ttggtgcgggcacaaatcacattgtatgagccaaggggtgactatcaactgattgtagaa
agtatccagcctgccggagatggtttgctgcaacaacagtttgagatgttaaaacaaaag
ctttccaccgaaggcttgttcgatcaaattcataaaaaatcattgccctctccggccaaa
cgacttggtgtcatcacttccagtagtggcgcagcactgcatgatattctgcatatcctg
aaacgccgtgatccttccttgccaatcgtcatttatcctacagctgttcagggagccgaa
gcaccattacagattattcgggcaatcgaactggcaaatgcacgacaagagtgtgatgtt
ttgattgtcggccgcggcggcggatccttggaagacttgtggtgtttcaatgatgaacaa
gtagcacgggcaatattccaaagccatattcccattgttagtgctgtcggtcatgaaacc
gatgtcactattgcggattttgtcgctgatttacgcgcaccgacaccttctgcggcagca
gagttagttagccgcaatcaaatagagttattgcgacaaatacaatccctgcaacaacgt
ctggaaatggcaatggattatttctttgctcaaaaacaacagagagttaatgtattgcag
catcgcctcctgcagcaacgtcctgatttgcaactggcacgtcaacagaatcatttagct
gagttacggcaaaagttgattgatcgttttttacgttgcctgaaacagcgatcagtttca
tatgagaagctgaatcaacgattgttacaaatccatcctgagcgggaaattcagcgctac
agccaatccatccaacaatttgattttcgtttaaaacagtccatcgaacgacagttaggg
cgttatcgggaaaagtttgccatttcctgttcgcgcatggaggctgttagcccactggca
acgttaagtcgtggttatagtattagcgaagctcctgatggaaagttactaagacaggtt
aagcaagtcaaagcaggtgatatgctgaaaacacggttgcaggatggctggattgatagc
caggtaacgcaggttacaaaagccaataagagaaagaaattaaaatag
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