KEGG   Xenorhabdus griffiniae: QL128_12400
Entry
QL128_12400       CDS       T09400                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
xgr  Xenorhabdus griffiniae
Brite
KEGG Orthology (KO) [BR:xgr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xgr03400]
    QL128_12400 (helD)
Enzymes [BR:xgr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QL128_12400 (helD)
DNA repair and recombination proteins [BR:xgr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    QL128_12400 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 ResIII DEAD
Other DBs
NCBI-ProteinID: WMV70999
LinkDB
Position
complement(2787034..2789088)
AA seq 684 aa
MELKSTQIGQRLARHPYNRVRLLNAGIEVSGDKHQYLIPFNQLIGIQCKRGIVWGELEFE
LPEGKVVRLHGTEWQQTQRFYHYLLKEWQKWSLDMSDVSADVLAVQVNEIAKIKQQNRWL
KAADLVSIQQQIKETFQALPLPLQRVTQFENCRKNYEICLDWLESGEKIIQTLNRQWVDH
MLVEYGQFFQTIETSPLDRAQCQAVINGEQNILVLAGAGSGKTAVLIARAGWLLLRQSAL
PEQILLLAFDNWAADKMNERIQARLGTQEIKAKTFHALALHIIQQGSNQSPKISELEINL
QKRRDFLVQEWQKQCGEKKAQAKGWREWLNEELGWQLPEGEYWHDKSLAIRLSVRLERWL
ELMRMQGSSQKEMLEQAPTAYIDAFQKRLRLMAPLLKAWKSALKSEEAVDFPGLIHQAVN
ILQKGRFISPWKHILVDEFQDISPLALRLLTALKAQNKQSHLFVAGDDWQAIYRFSGAEL
PLTTAFSTYFGKGVECTLDTTYRLNDRIGEIANQFVQQNPYQFKKPLNSLTKGSKKSVVI
LPEEQLEALLNKMSGYVTRQETILLLARYHYLKPELLKKAPTRWPNLKIEFMTIYAAKGQ
QADYVIILGLQQGQDGFPVPARESVIEQVLLPQPENFPDAEERRLLYVALTRAKKQVWLM
QEPKKPSIFIHQLAHLGVPIQRKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaactaaaatcaacgcaaattggccaacgccttgctcggcacccttataatcgggta
cgtctactgaatgctggcattgaagttagcggtgacaagcaccagtaccttattccattt
aatcaattaattggtattcagtgtaagcgagggattgtttggggggaattggaatttgaa
ctgccagaaggaaaagtcgttcgcttgcatggtactgaatggcagcaaacacaacgtttt
taccattatctattaaaagaatggcaaaaatggagtctcgatatgagcgatgtcagtgct
gatgttttggctgttcaagtaaatgaaatagctaaaatcaaacaacagaatcgttggcta
aaagccgctgatttagtttccatacagcaacaaatcaaggaaacatttcaggctttacct
ttgccattacaacgagtcacgcaatttgaaaattgtcggaaaaattatgagatttgtctg
gattggttagagtctggtgaaaaaataattcaaacgctgaatcgacaatgggttgatcat
atgttggtggaatatggacaatttttccagacaatagaaacgtcaccacttgatcgcgct
caatgtcaggcggtgattaatggtgaacaaaatattctggtattagcaggggcgggcagt
ggaaaaaccgctgttttaattgcgcgcgcagggtggttattgttacgtcaatctgcactt
cctgagcaaattttgctgttggctttcgataactgggctgctgataaaatgaatgaacgt
attcaggctcgtttgggaacccaggaaataaaagcaaaaacatttcatgctctggcattg
catattattcagcaaggcagtaatcagtcgccaaaaattagcgagctggaaattaatctg
caaaagcgccgtgattttctcgttcaagaatggcaaaaacagtgtggagaaaaaaaagca
caagctaaaggttggcgagaatggttgaatgaagaattgggctggcaattgccggaaggt
gaatattggcatgataagtcattggcgattcgtttatcggtccgtttagaacgttggctg
gaattaatgcgtatgcagggtagcagtcaaaaagagatgcttgaacaagcacctactgct
tatattgatgcatttcaaaaacgtctacggctgatggcacctttactgaaagcctggaaa
tcggcattgaaatctgaggaggccgtcgactttccaggtttgatccatcaggcggtgaat
attttacagaaaggtcgatttatcagcccgtggaaacatattctggtggatgaatttcaa
gatatttcccccttggcgctcagattactaacggcattgaaggcacaaaataagcaaagt
catttatttgtggcgggagatgattggcaggcaatttatcgctttagtggcgctgaatta
ccgttaacgacagcattttcaacctattttggtaaaggcgttgagtgtacattggatacg
acgtatcgtcttaatgaccgtattggggaaattgccaaccaatttgtgcaacaaaatcct
tatcaatttaaaaagcctcttaatagcctgacgaaaggcagtaaaaaatcggttgttatt
ttaccggaagagcagttagaggcattacttaataaaatgagtggttatgtgaccaggcag
gaaactatcttattattggcacgttatcactatctcaaacctgaattattgaaaaaagca
ccgactcgttggccaaatttgaagattgaatttatgacaatttatgcagctaaagggcag
caagcggattatgtcattatactgggattgcaacagggccaagacggctttccggtacca
gcacgagaatctgtaatagagcaagttttattaccacaacctgaaaatttccctgatgca
gaagagcgtcgtctgttatacgttgcattaacgcgagcaaaaaagcaggtttggttaatg
caggaaccgaaaaaaccatctattttcattcatcaactggcacacttgggcgtaccgatt
cagcgtaagccctaa

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