Xenorhabdus griffiniae: QL128_12675
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Entry
QL128_12675 CDS
T09400
Symbol
ycaO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
xgr
Xenorhabdus griffiniae
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xgr03009
]
QL128_12675 (ycaO)
Ribosome biogenesis [BR:
xgr03009
]
Prokaryotic type
ribosomal protein modification factors
QL128_12675 (ycaO)
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Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
WMV71050
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Position
2859521..2861284
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AA seq
587 aa
AA seq
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MTQTYIPGKDAALEDSINRFQHKLKSLGFNIEEASWLNPVPNVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGNTVANGDFVHYPDEKWFPLPEDDSLPEG
ILDERLHRFYNPDNALCASQLVDLQSGNEARGICALPFTRQSDNQTIYIPMNIVGNLYVS
NGMSAGNTMNEARVQGLSEVFERYVKNRIIAECISLPEIPQDIMDRYPSVVESVNKLQEE
GFPLYCYDASLGGQFPVICVVLFNPNNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPSFDNEEVSEHTNLETHFIDSSGVISWDLFKQDADYAFADWNFSGTTEEEFSTLM
GIFNKLDAEVYIADYEHLGVYACRILVPGMSDIYPVEDLHIANNIMGTHLRDTILALPES
QWQPEEYLALLEQLDDEGLDDFTRVRELLGIAVGKDNGWSNLRIGELKSMLALAGKDLEQ
ALIWVEWTQDFNASVFTTERANYYRCLQTLLLLTQEEDRQPEQYYQAFVKMYGQDTVDAA
SAAIAGENGFYGLWSVDSELKALPAHQALLTAYEKLQKAKREFWGNK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacctatatcccaggcaaagacgccgcgttagaggactccattaatcgcttt
cagcacaaattgaagtcccttggttttaatattgaagaagcctcatggctgaatcctgtt
ccaaatgtttggtcagtacatattcgcgatcgtgactgcccactgtgctttaccaatggc
aagggtgccagcaagaaagcggcattggcctctgctttgggtgaatattttgagcgtcta
tcgacaaactatttctttgctgatttttatctgggtaataccgttgccaatggcgacttt
gttcattatccagatgaaaaatggttcccgttgccagaagatgactctctgccagaaggg
atcttagacgaacgtctgcatcgtttttacaatccagataacgcgctctgtgctagccag
ttagtggatttacaatctggcaatgaagcgcgggggatctgcgccctgccatttactcgc
cagtcagataatcaaacgatttatattccaatgaatattgtcggaaatttgtatgtttca
aacggcatgtcagccggcaataccatgaacgaagcacgtgtgcagggattatctgaagta
ttcgagcgctatgtgaaaaaccgcattatcgcagagtgcatcagtctgcctgaaattcca
caagatattatggatcgctacccaagcgtcgttgaatcagtcaataagttgcaggaagaa
ggtttcccgctttattgttacgatgcctcactgggtgggcagttcccggttatttgcgtt
gtactgttcaatcctaataatggcacgtgttttgcctcctttggtgcccatcctgatttt
ggtgttgcattggagcgcacagtcacagaactgttgcaaggccggagcctgaaagatctg
gatgtcttcactccaccaagctttgataatgaagaagtttctgaacataccaatctggaa
actcactttattgattcgagcggtgtaatcagttgggatctcttcaagcaggatgcggac
tatgcatttgctgactggaatttcagtggaacaacagaagaagagttctccaccttgatg
gggatcttcaataaactggatgctgaagtttatatcgctgattatgagcatcttggtgtt
tacgcctgccgcattctggttcctggtatgtcagatatttatccagtcgaagatctgcac
attgccaataacataatgggaactcatctgcgtgataccattctggcattgccggagagt
caatggcagccagaagaatatctggctcttctcgaacagttagatgatgaaggcttggat
gactttacccgtgtccgtgagttattgggcattgctgtgggtaaagataacggttggagc
aatctgcgtatcggtgaattgaaatctatgctggcactggcaggcaaagatttggaacaa
gccttgatttgggtggaatggacacaggatttcaacgcttccgttttcaccactgagcga
gcgaactattaccgctgcctgcaaacgctgttactgttaactcaagaagaagatcgccaa
ccagagcaatattatcaggcgtttgtaaaaatgtacggtcaagacactgtcgatgctgct
tcagcagccattgccggagaaaacggcttctatggtctatggtctgttgactcagagtta
aaagcattaccagcccatcaagcattattaactgcttatgaaaaattgcaaaaagccaag
cgtgaattttggggcaataaataa
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