Xenorhabdus griffiniae: QL128_13120
Help
Entry
QL128_13120 CDS
T09400
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QL128_13120 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgr03019
]
QL128_13120 (rhlE)
Enzymes [BR:
xgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QL128_13120 (rhlE)
Messenger RNA biogenesis [BR:
xgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QL128_13120 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25_NTPase-like
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WMV71132
LinkDB
All DBs
Position
complement(2964984..2966318)
Genome browser
AA seq
444 aa
AA seq
DB search
MNFESLGLKADILRAVEEQGYVEPTPIQQQAIPVVLSGKDLLASAQTGTGKTAGFTLPIL
QRLSESPIQAKGRRPVRALVLTPTRELAAQVGENVRNYSKYLRLRSFVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSRVEILVLDEADRMLDMGFIHDIRRVLNKLPAK
RQNLLFSATFSDEIKSLANKLLKEPVSVEVARRNSASEQIDQSIHFVDKKRKGELLSYMI
GSQNWQQVLIFTRTKHGANRLAEQLNKDGVTAAAIHGNKSQGARTRALSDFKTGQIRALV
ATDIAARGLDIDQLPYVVNYELPNVAEDYVHRIGRTGRAEATGQAISLVCVDEHKLLKDI
ERLLKREIPRIAISGYEPDPSIKAEPIQNGRNSRGNNFHSNSSSRGNHSRGNNPHRNGKQ
GHSKQNRINKERATKTSRASVAGE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgagtcactcggcttgaaggctgatattttgcgtgccgttgaagaacaaggc
tacgtggaacctacccctattcagcagcaggccattcctgttgtgttatccggcaaagat
ctactggccagtgcccagacaggcacaggaaaaacagcaggatttactttgcctattttg
caacgcttgagtgaatccccgattcaggcaaaaggccgccgtccggtcagagcgttggtt
ttaaccccaacccgagaactagcggctcaggtgggagaaaatgtacgtaattacagcaaa
tatcttagattacgttcgtttgttgtctttggcggagtcagcattaatccgcagatgatg
aaactgcgtggtggtgtcgatattctggtcgcaacgccaggccgcttgctggatttggag
caccaaaatgcggtcgatctttcacgcgttgagattctggttttggatgaagcagatcgc
atgttggacatgggttttattcacgatattcgtcgggtgttgaacaaactgccagcaaaa
cgccaaaacttactcttttcggcgacattttctgatgaaattaagagcctcgccaataaa
ttactgaaagagcctgtcagcgtagaagtagcacggcgtaactcggcctctgagcaaatt
gatcaatccatccattttgttgacaaaaagcgcaagggtgaattgctctcttacatgata
ggcagccagaactggcaacaggtactgatatttacgcgtactaaacatggtgcaaaccgg
ctggcggaacaattaaataaagatggtgtgactgcggctgcgatccacggtaacaaaagt
cagggagcaagaacccgtgcactgtctgatttcaagacagggcaaatccgtgcgttggtg
gcaacggatattgctgcccgtgggctggatattgaccaattgccttatgtcgtcaactac
gaattaccaaacgttgccgaagattatgtgcatcgaattggtcgtactgggcgcgctgag
gcgactggacaggcgatatcgctggtgtgtgtcgatgaacacaagctcctgaaagatatt
gagcgcctattgaagcgagaaattccacgcattgccatttcgggttatgaacctgatcct
tctatcaaagctgaacctatccaaaatggacgtaatagccgtggtaataacttccatagt
aatagcagctcgcgcggtaatcattctcgcggtaataaccctcatcgaaatggcaaacag
ggtcattccaaacaaaatcggataaataaagaacgcgcaaccaaaacctcacgtgcttcg
gtagcgggagaataa
DBGET
integrated database retrieval system
